Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Kcnu1O54982 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.32■□□□□ 0.52
Kcnu1O54982 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Kcnu1O54982 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Kcnu1O54982 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kcnu1O54982 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Kcnu1O54982 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kcnu1O54982 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Kcnu1O54982 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.31■□□□□ 0.52
Kcnu1O54982 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Kcnu1O54982 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.31■□□□□ 0.52
Kcnu1O54982 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.31■□□□□ 0.52
Kcnu1O54982 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kcnu1O54982 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Kcnu1O54982 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.31■□□□□ 0.52
Kcnu1O54982 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Kcnu1O54982 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kcnu1O54982 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kcnu1O54982 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Kcnu1O54982 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kcnu1O54982 Gm15378-201ENSMUST00000121894 207 ntBASIC18.3■□□□□ 0.52
Kcnu1O54982 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kcnu1O54982 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Kcnu1O54982 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kcnu1O54982 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kcnu1O54982 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kcnu1O54982 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kcnu1O54982 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kcnu1O54982 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kcnu1O54982 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kcnu1O54982 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.3■□□□□ 0.52
Kcnu1O54982 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Kcnu1O54982 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kcnu1O54982 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kcnu1O54982 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kcnu1O54982 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kcnu1O54982 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.29■□□□□ 0.52
Kcnu1O54982 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kcnu1O54982 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kcnu1O54982 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kcnu1O54982 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Kcnu1O54982 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Kcnu1O54982 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.29■□□□□ 0.52
Kcnu1O54982 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kcnu1O54982 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kcnu1O54982 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kcnu1O54982 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kcnu1O54982 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kcnu1O54982 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Kcnu1O54982 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Kcnu1O54982 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Kcnu1O54982 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.28■□□□□ 0.52
Kcnu1O54982 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kcnu1O54982 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Kcnu1O54982 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Kcnu1O54982 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.28■□□□□ 0.52
Kcnu1O54982 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kcnu1O54982 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kcnu1O54982 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kcnu1O54982 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Kcnu1O54982 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Kcnu1O54982 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Kcnu1O54982 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.28■□□□□ 0.52
Kcnu1O54982 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Kcnu1O54982 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.28■□□□□ 0.52
Kcnu1O54982 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Kcnu1O54982 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Kcnu1O54982 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Kcnu1O54982 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Kcnu1O54982 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Kcnu1O54982 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Kcnu1O54982 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.27■□□□□ 0.52
Kcnu1O54982 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Kcnu1O54982 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Kcnu1O54982 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Kcnu1O54982 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Kcnu1O54982 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Kcnu1O54982 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Kcnu1O54982 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Kcnu1O54982 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Kcnu1O54982 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Kcnu1O54982 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Kcnu1O54982 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Kcnu1O54982 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Kcnu1O54982 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.26■□□□□ 0.51
Kcnu1O54982 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Kcnu1O54982 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Kcnu1O54982 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Kcnu1O54982 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.26■□□□□ 0.51
Kcnu1O54982 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Kcnu1O54982 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms