Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkaO54804 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ChkaO54804 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkaO54804 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.39■□□□□ 0.37
ChkaO54804 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ChkaO54804 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkaO54804 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkaO54804 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ChkaO54804 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkaO54804 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkaO54804 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkaO54804 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkaO54804 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkaO54804 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.39■□□□□ 0.37
ChkaO54804 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
ChkaO54804 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkaO54804 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkaO54804 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkaO54804 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkaO54804 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ChkaO54804 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkaO54804 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ChkaO54804 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkaO54804 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.38■□□□□ 0.37
ChkaO54804 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.38■□□□□ 0.37
ChkaO54804 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.38■□□□□ 0.37
ChkaO54804 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.38■□□□□ 0.37
ChkaO54804 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.38■□□□□ 0.37
ChkaO54804 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.38■□□□□ 0.37
ChkaO54804 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.38■□□□□ 0.37
ChkaO54804 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkaO54804 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkaO54804 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkaO54804 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkaO54804 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.37■□□□□ 0.37
ChkaO54804 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ChkaO54804 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ChkaO54804 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ChkaO54804 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ChkaO54804 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ChkaO54804 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ChkaO54804 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ChkaO54804 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ChkaO54804 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ChkaO54804 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ChkaO54804 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.37■□□□□ 0.37
ChkaO54804 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ChkaO54804 Gm37292-201ENSMUST00000192062 758 ntBASIC17.37■□□□□ 0.37
ChkaO54804 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ChkaO54804 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ChkaO54804 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ChkaO54804 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ChkaO54804 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ChkaO54804 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ChkaO54804 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ChkaO54804 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.37■□□□□ 0.37
ChkaO54804 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.37■□□□□ 0.37
ChkaO54804 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ChkaO54804 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ChkaO54804 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ChkaO54804 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ChkaO54804 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ChkaO54804 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
ChkaO54804 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ChkaO54804 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ChkaO54804 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ChkaO54804 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ChkaO54804 Gm37856-201ENSMUST00000191634 999 ntBASIC17.36■□□□□ 0.37
ChkaO54804 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ChkaO54804 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ChkaO54804 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ChkaO54804 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.36■□□□□ 0.37
ChkaO54804 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ChkaO54804 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ChkaO54804 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
ChkaO54804 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.35■□□□□ 0.37
ChkaO54804 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ChkaO54804 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ChkaO54804 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.35■□□□□ 0.37
ChkaO54804 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ChkaO54804 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ChkaO54804 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.35■□□□□ 0.37
ChkaO54804 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ChkaO54804 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.35■□□□□ 0.37
ChkaO54804 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ChkaO54804 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.35■□□□□ 0.37
ChkaO54804 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ChkaO54804 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.35■□□□□ 0.37
ChkaO54804 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ChkaO54804 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ChkaO54804 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ChkaO54804 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ChkaO54804 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ChkaO54804 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ChkaO54804 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ChkaO54804 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.35■□□□□ 0.37
ChkaO54804 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ChkaO54804 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.34■□□□□ 0.37
ChkaO54804 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ChkaO54804 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms