Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Shisa8J3QNX5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shisa8J3QNX5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Shisa8J3QNX5 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.72■□□□□ 0.11
Shisa8J3QNX5 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.72■□□□□ 0.11
Shisa8J3QNX5 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Shisa8J3QNX5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shisa8J3QNX5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shisa8J3QNX5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Shisa8J3QNX5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shisa8J3QNX5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shisa8J3QNX5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shisa8J3QNX5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Shisa8J3QNX5 Gm38285-201ENSMUST00000192928 922 ntBASIC15.71■□□□□ 0.11
Shisa8J3QNX5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shisa8J3QNX5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shisa8J3QNX5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shisa8J3QNX5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Shisa8J3QNX5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Shisa8J3QNX5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shisa8J3QNX5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shisa8J3QNX5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Shisa8J3QNX5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Shisa8J3QNX5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Shisa8J3QNX5 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa8J3QNX5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Gm10493-201ENSMUST00000097270 612 ntBASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa8J3QNX5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Gm13401-201ENSMUST00000117074 291 ntBASIC15.68■□□□□ 0.1
Shisa8J3QNX5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Gm10033-202ENSMUST00000211874 928 ntBASIC15.68■□□□□ 0.1
Shisa8J3QNX5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa8J3QNX5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms