Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.21□□□□□ -0.29
Trbv17A0A140T8P8 Gm42545-201ENSMUST00000202755 922 ntBASIC13.21□□□□□ -0.29
Trbv17A0A140T8P8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv17A0A140T8P8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trbv17A0A140T8P8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv17A0A140T8P8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv17A0A140T8P8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv17A0A140T8P8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv17A0A140T8P8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv17A0A140T8P8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv17A0A140T8P8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv17A0A140T8P8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Mir2861-201ENSMUST00000175539 82 ntBASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.2□□□□□ -0.3
Trbv17A0A140T8P8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Gm15378-201ENSMUST00000121894 207 ntBASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Gm27011-201ENSMUST00000182352 972 ntBASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trbv17A0A140T8P8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 Gm8520-201ENSMUST00000186517 868 ntBASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 Gm18025-201ENSMUST00000221733 862 ntBASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trbv17A0A140T8P8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trbv17A0A140T8P8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trbv17A0A140T8P8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms