Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Gm5786-201ENSMUST00000085368 882 ntBASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tcrg-V4A0A0B4J1J8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms