Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav4n-4A0A075B615 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 CT030146.1-201ENSMUST00000220919 217 ntBASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4n-4A0A075B615 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4n-4A0A075B615 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4n-4A0A075B615 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav4n-4A0A075B615 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav4n-4A0A075B615 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Trav4n-4A0A075B615 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav4n-4A0A075B615 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav4n-4A0A075B615 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC11.96□□□□□ -0.5
Trav4n-4A0A075B615 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav4n-4A0A075B615 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav4n-4A0A075B615 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 Gm11175-201ENSMUST00000116172 543 ntBASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4n-4A0A075B615 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms