Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav5-1A0A075B5Z7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Gm7977-201ENSMUST00000193787 748 ntBASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav5-1A0A075B5Z7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Gm10013-201ENSMUST00000106074 672 ntBASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Gm18958-201ENSMUST00000174258 762 ntBASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav5-1A0A075B5Z7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Grk6-206ENSMUST00000224995 2971 ntBASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Gm18101-201ENSMUST00000215769 548 ntBASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav5-1A0A075B5Z7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-1A0A075B5Z7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-1A0A075B5Z7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Trav5-1A0A075B5Z7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trav5-1A0A075B5Z7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav5-1A0A075B5Z7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-1A0A075B5Z7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-1A0A075B5Z7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-1A0A075B5Z7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-1A0A075B5Z7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-1A0A075B5Z7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-1A0A075B5Z7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav5-1A0A075B5Z7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav5-1A0A075B5Z7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav5-1A0A075B5Z7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms