Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
H2afb3S4R1G7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.3■■□□□ 1
H2afb3S4R1G7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.3■■□□□ 1
H2afb3S4R1G7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.3■■□□□ 1
H2afb3S4R1G7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H2afb3S4R1G7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H2afb3S4R1G7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
H2afb3S4R1G7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.28■■□□□ 1
H2afb3S4R1G7 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.28■■□□□ 1
H2afb3S4R1G7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
H2afb3S4R1G7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
H2afb3S4R1G7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
H2afb3S4R1G7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
H2afb3S4R1G7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
H2afb3S4R1G7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
H2afb3S4R1G7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
H2afb3S4R1G7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.26■□□□□ 0.99
H2afb3S4R1G7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
H2afb3S4R1G7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
H2afb3S4R1G7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.25■□□□□ 0.99
H2afb3S4R1G7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.25■□□□□ 0.99
H2afb3S4R1G7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2afb3S4R1G7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2afb3S4R1G7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.24■□□□□ 0.99
H2afb3S4R1G7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
H2afb3S4R1G7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.23■□□□□ 0.99
H2afb3S4R1G7 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.23■□□□□ 0.99
H2afb3S4R1G7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
H2afb3S4R1G7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H2afb3S4R1G7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.23■□□□□ 0.99
H2afb3S4R1G7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2afb3S4R1G7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2afb3S4R1G7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
H2afb3S4R1G7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
H2afb3S4R1G7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
H2afb3S4R1G7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
H2afb3S4R1G7 Gm9397-201ENSMUST00000200125 605 ntBASIC21.2■□□□□ 0.98
H2afb3S4R1G7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.2■□□□□ 0.98
H2afb3S4R1G7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
H2afb3S4R1G7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
H2afb3S4R1G7 Gm24970-201ENSMUST00000175582 82 ntBASIC21.19■□□□□ 0.98
H2afb3S4R1G7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.19■□□□□ 0.98
H2afb3S4R1G7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H2afb3S4R1G7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
H2afb3S4R1G7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.18■□□□□ 0.98
H2afb3S4R1G7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
H2afb3S4R1G7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
H2afb3S4R1G7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.17■□□□□ 0.98
H2afb3S4R1G7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
H2afb3S4R1G7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
H2afb3S4R1G7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2afb3S4R1G7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
H2afb3S4R1G7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.16■□□□□ 0.98
H2afb3S4R1G7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
H2afb3S4R1G7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.15■□□□□ 0.98
H2afb3S4R1G7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
H2afb3S4R1G7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
H2afb3S4R1G7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
H2afb3S4R1G7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
H2afb3S4R1G7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
H2afb3S4R1G7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
H2afb3S4R1G7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
H2afb3S4R1G7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
H2afb3S4R1G7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H2afb3S4R1G7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
H2afb3S4R1G7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.13■□□□□ 0.97
H2afb3S4R1G7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H2afb3S4R1G7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2afb3S4R1G7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.12■□□□□ 0.97
H2afb3S4R1G7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2afb3S4R1G7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2afb3S4R1G7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2afb3S4R1G7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.11■□□□□ 0.97
H2afb3S4R1G7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2afb3S4R1G7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2afb3S4R1G7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2afb3S4R1G7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2afb3S4R1G7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
H2afb3S4R1G7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2afb3S4R1G7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2afb3S4R1G7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.09■□□□□ 0.97
H2afb3S4R1G7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2afb3S4R1G7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2afb3S4R1G7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
H2afb3S4R1G7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
H2afb3S4R1G7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
H2afb3S4R1G7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
H2afb3S4R1G7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
H2afb3S4R1G7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
H2afb3S4R1G7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H2afb3S4R1G7 Gm45855-201ENSMUST00000212546 880 ntBASIC21.07■□□□□ 0.96
H2afb3S4R1G7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
H2afb3S4R1G7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
H2afb3S4R1G7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
H2afb3S4R1G7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.06■□□□□ 0.96
H2afb3S4R1G7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
H2afb3S4R1G7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2afb3S4R1G7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2afb3S4R1G7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2afb3S4R1G7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms