Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Smarcb1Q9Z0H3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Smarcb1Q9Z0H3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Smarcb1Q9Z0H3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Smarcb1Q9Z0H3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Smarcb1Q9Z0H3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Smarcb1Q9Z0H3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Smarcb1Q9Z0H3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Smarcb1Q9Z0H3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.21■■□□□ 1.63
Smarcb1Q9Z0H3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.2■■□□□ 1.62
Smarcb1Q9Z0H3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Smarcb1Q9Z0H3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Smarcb1Q9Z0H3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Smarcb1Q9Z0H3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Smarcb1Q9Z0H3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Smarcb1Q9Z0H3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
Smarcb1Q9Z0H3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Smarcb1Q9Z0H3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Smarcb1Q9Z0H3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.18■■□□□ 1.62
Smarcb1Q9Z0H3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.17■■□□□ 1.62
Smarcb1Q9Z0H3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.16■■□□□ 1.62
Smarcb1Q9Z0H3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Smarcb1Q9Z0H3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Smarcb1Q9Z0H3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.14■■□□□ 1.62
Smarcb1Q9Z0H3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Smarcb1Q9Z0H3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Smarcb1Q9Z0H3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Smarcb1Q9Z0H3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Smarcb1Q9Z0H3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Smarcb1Q9Z0H3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.09■■□□□ 1.61
Smarcb1Q9Z0H3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Smarcb1Q9Z0H3 Particl-201ENSMUST00000205370 1560 ntBASIC25.08■■□□□ 1.61
Smarcb1Q9Z0H3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Smarcb1Q9Z0H3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Smarcb1Q9Z0H3 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.06■■□□□ 1.6
Smarcb1Q9Z0H3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Smarcb1Q9Z0H3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Smarcb1Q9Z0H3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
Smarcb1Q9Z0H3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Smarcb1Q9Z0H3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Smarcb1Q9Z0H3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Smarcb1Q9Z0H3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Smarcb1Q9Z0H3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Smarcb1Q9Z0H3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Smarcb1Q9Z0H3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25■■□□□ 1.59
Smarcb1Q9Z0H3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Smarcb1Q9Z0H3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25■■□□□ 1.59
Smarcb1Q9Z0H3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Smarcb1Q9Z0H3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Smarcb1Q9Z0H3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.99■■□□□ 1.59
Smarcb1Q9Z0H3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Smarcb1Q9Z0H3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Smarcb1Q9Z0H3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Smarcb1Q9Z0H3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.96■■□□□ 1.59
Smarcb1Q9Z0H3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Smarcb1Q9Z0H3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Smarcb1Q9Z0H3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.94■■□□□ 1.58
Smarcb1Q9Z0H3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Smarcb1Q9Z0H3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Smarcb1Q9Z0H3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.93■■□□□ 1.58
Smarcb1Q9Z0H3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.93■■□□□ 1.58
Smarcb1Q9Z0H3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.92■■□□□ 1.58
Smarcb1Q9Z0H3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Smarcb1Q9Z0H3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Smarcb1Q9Z0H3 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.91■■□□□ 1.58
Smarcb1Q9Z0H3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Smarcb1Q9Z0H3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
Smarcb1Q9Z0H3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Smarcb1Q9Z0H3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Smarcb1Q9Z0H3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Smarcb1Q9Z0H3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Smarcb1Q9Z0H3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Smarcb1Q9Z0H3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Smarcb1Q9Z0H3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Smarcb1Q9Z0H3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Smarcb1Q9Z0H3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Smarcb1Q9Z0H3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Smarcb1Q9Z0H3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.86■■□□□ 1.57
Smarcb1Q9Z0H3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.86■■□□□ 1.57
Smarcb1Q9Z0H3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.85■■□□□ 1.57
Smarcb1Q9Z0H3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
Smarcb1Q9Z0H3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Smarcb1Q9Z0H3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Smarcb1Q9Z0H3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Smarcb1Q9Z0H3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.83■■□□□ 1.57
Smarcb1Q9Z0H3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.83■■□□□ 1.57
Smarcb1Q9Z0H3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
Smarcb1Q9Z0H3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Smarcb1Q9Z0H3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.81■■□□□ 1.56
Smarcb1Q9Z0H3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Smarcb1Q9Z0H3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Smarcb1Q9Z0H3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Smarcb1Q9Z0H3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Smarcb1Q9Z0H3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Smarcb1Q9Z0H3 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.78■■□□□ 1.56
Smarcb1Q9Z0H3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.78■■□□□ 1.56
Smarcb1Q9Z0H3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Smarcb1Q9Z0H3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Smarcb1Q9Z0H3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.77■■□□□ 1.56
Smarcb1Q9Z0H3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms