Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col13a1Q9R1N9 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.32■□□□□ 0.84
Col13a1Q9R1N9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col13a1Q9R1N9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col13a1Q9R1N9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col13a1Q9R1N9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.3■□□□□ 0.84
Col13a1Q9R1N9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col13a1Q9R1N9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col13a1Q9R1N9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col13a1Q9R1N9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col13a1Q9R1N9 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.29■□□□□ 0.84
Col13a1Q9R1N9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col13a1Q9R1N9 Zxda-201ENSMUST00000117281 2621 ntBASIC20.27■□□□□ 0.84
Col13a1Q9R1N9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
Col13a1Q9R1N9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Col13a1Q9R1N9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col13a1Q9R1N9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col13a1Q9R1N9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col13a1Q9R1N9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.25■□□□□ 0.83
Col13a1Q9R1N9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.25■□□□□ 0.83
Col13a1Q9R1N9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col13a1Q9R1N9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col13a1Q9R1N9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col13a1Q9R1N9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col13a1Q9R1N9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.24■□□□□ 0.83
Col13a1Q9R1N9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.24■□□□□ 0.83
Col13a1Q9R1N9 Gm12366-201ENSMUST00000121722 873 ntBASIC20.24■□□□□ 0.83
Col13a1Q9R1N9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.24■□□□□ 0.83
Col13a1Q9R1N9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.24■□□□□ 0.83
Col13a1Q9R1N9 Gm5786-201ENSMUST00000085368 882 ntBASIC20.24■□□□□ 0.83
Col13a1Q9R1N9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col13a1Q9R1N9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.23■□□□□ 0.83
Col13a1Q9R1N9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col13a1Q9R1N9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Col13a1Q9R1N9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col13a1Q9R1N9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col13a1Q9R1N9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col13a1Q9R1N9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col13a1Q9R1N9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col13a1Q9R1N9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col13a1Q9R1N9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Col13a1Q9R1N9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col13a1Q9R1N9 Scarna2-201ENSMUST00000157560 414 ntBASIC20.21■□□□□ 0.83
Col13a1Q9R1N9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col13a1Q9R1N9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col13a1Q9R1N9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col13a1Q9R1N9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Col13a1Q9R1N9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col13a1Q9R1N9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.19■□□□□ 0.82
Col13a1Q9R1N9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.19■□□□□ 0.82
Col13a1Q9R1N9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col13a1Q9R1N9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col13a1Q9R1N9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col13a1Q9R1N9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col13a1Q9R1N9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.16■□□□□ 0.82
Col13a1Q9R1N9 Gm11687-201ENSMUST00000118911 886 ntBASIC20.15■□□□□ 0.82
Col13a1Q9R1N9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Col13a1Q9R1N9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Col13a1Q9R1N9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Col13a1Q9R1N9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.13■□□□□ 0.81
Col13a1Q9R1N9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col13a1Q9R1N9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col13a1Q9R1N9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col13a1Q9R1N9 Gm4799-201ENSMUST00000095396 657 ntBASIC20.13■□□□□ 0.81
Col13a1Q9R1N9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col13a1Q9R1N9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col13a1Q9R1N9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col13a1Q9R1N9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col13a1Q9R1N9 Gm16437-201ENSMUST00000025669 507 ntBASIC20.11■□□□□ 0.81
Col13a1Q9R1N9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col13a1Q9R1N9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col13a1Q9R1N9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col13a1Q9R1N9 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.1■□□□□ 0.81
Col13a1Q9R1N9 Gm9806-201ENSMUST00000051080 552 ntBASIC20.1■□□□□ 0.81
Col13a1Q9R1N9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col13a1Q9R1N9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.09■□□□□ 0.81
Col13a1Q9R1N9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col13a1Q9R1N9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col13a1Q9R1N9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col13a1Q9R1N9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col13a1Q9R1N9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Col13a1Q9R1N9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col13a1Q9R1N9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.08■□□□□ 0.81
Col13a1Q9R1N9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col13a1Q9R1N9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Col13a1Q9R1N9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col13a1Q9R1N9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Col13a1Q9R1N9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col13a1Q9R1N9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col13a1Q9R1N9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col13a1Q9R1N9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col13a1Q9R1N9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col13a1Q9R1N9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col13a1Q9R1N9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col13a1Q9R1N9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col13a1Q9R1N9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col13a1Q9R1N9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Col13a1Q9R1N9 Gm7332-201ENSMUST00000118351 454 ntBASIC20.04■□□□□ 0.8
Col13a1Q9R1N9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col13a1Q9R1N9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms