Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nubp1Q9R060 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nubp1Q9R060 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Nubp1Q9R060 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nubp1Q9R060 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Nubp1Q9R060 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nubp1Q9R060 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nubp1Q9R060 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nubp1Q9R060 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nubp1Q9R060 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nubp1Q9R060 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.81■□□□□ 0.92
Nubp1Q9R060 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nubp1Q9R060 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.8■□□□□ 0.92
Nubp1Q9R060 Gm12366-201ENSMUST00000121722 873 ntBASIC20.8■□□□□ 0.92
Nubp1Q9R060 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.8■□□□□ 0.92
Nubp1Q9R060 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.8■□□□□ 0.92
Nubp1Q9R060 Gm5786-201ENSMUST00000085368 882 ntBASIC20.8■□□□□ 0.92
Nubp1Q9R060 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nubp1Q9R060 Gm11687-201ENSMUST00000118911 886 ntBASIC20.79■□□□□ 0.92
Nubp1Q9R060 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nubp1Q9R060 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nubp1Q9R060 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nubp1Q9R060 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nubp1Q9R060 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nubp1Q9R060 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.76■□□□□ 0.91
Nubp1Q9R060 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.76■□□□□ 0.91
Nubp1Q9R060 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nubp1Q9R060 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.75■□□□□ 0.91
Nubp1Q9R060 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.75■□□□□ 0.91
Nubp1Q9R060 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.75■□□□□ 0.91
Nubp1Q9R060 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nubp1Q9R060 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nubp1Q9R060 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nubp1Q9R060 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nubp1Q9R060 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.74■□□□□ 0.91
Nubp1Q9R060 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nubp1Q9R060 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nubp1Q9R060 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nubp1Q9R060 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nubp1Q9R060 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nubp1Q9R060 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nubp1Q9R060 Gm9806-201ENSMUST00000051080 552 ntBASIC20.73■□□□□ 0.91
Nubp1Q9R060 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nubp1Q9R060 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nubp1Q9R060 Scarna2-201ENSMUST00000157560 414 ntBASIC20.72■□□□□ 0.91
Nubp1Q9R060 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.72■□□□□ 0.91
Nubp1Q9R060 Zxda-201ENSMUST00000117281 2621 ntBASIC20.72■□□□□ 0.91
Nubp1Q9R060 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nubp1Q9R060 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nubp1Q9R060 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Nubp1Q9R060 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Nubp1Q9R060 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nubp1Q9R060 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nubp1Q9R060 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nubp1Q9R060 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nubp1Q9R060 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nubp1Q9R060 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nubp1Q9R060 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nubp1Q9R060 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nubp1Q9R060 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nubp1Q9R060 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nubp1Q9R060 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nubp1Q9R060 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nubp1Q9R060 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nubp1Q9R060 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nubp1Q9R060 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nubp1Q9R060 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.65■□□□□ 0.9
Nubp1Q9R060 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nubp1Q9R060 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.65■□□□□ 0.9
Nubp1Q9R060 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nubp1Q9R060 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.64■□□□□ 0.89
Nubp1Q9R060 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.64■□□□□ 0.89
Nubp1Q9R060 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nubp1Q9R060 Gm7332-201ENSMUST00000118351 454 ntBASIC20.63■□□□□ 0.89
Nubp1Q9R060 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.63■□□□□ 0.89
Nubp1Q9R060 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nubp1Q9R060 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nubp1Q9R060 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nubp1Q9R060 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.62■□□□□ 0.89
Nubp1Q9R060 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.62■□□□□ 0.89
Nubp1Q9R060 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nubp1Q9R060 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nubp1Q9R060 Gm4799-201ENSMUST00000095396 657 ntBASIC20.61■□□□□ 0.89
Nubp1Q9R060 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nubp1Q9R060 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nubp1Q9R060 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.6■□□□□ 0.89
Nubp1Q9R060 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nubp1Q9R060 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.59■□□□□ 0.89
Nubp1Q9R060 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nubp1Q9R060 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nubp1Q9R060 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.58■□□□□ 0.89
Nubp1Q9R060 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nubp1Q9R060 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nubp1Q9R060 Gm16437-201ENSMUST00000025669 507 ntBASIC20.57■□□□□ 0.88
Nubp1Q9R060 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.57■□□□□ 0.88
Nubp1Q9R060 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.55■□□□□ 0.88
Nubp1Q9R060 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.55■□□□□ 0.88
Nubp1Q9R060 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Nubp1Q9R060 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nubp1Q9R060 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms