Protein–RNA interactions for Protein: Q9JIY8

Cml3, Probable N-acetyltransferase CML3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cml3Q9JIY8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cml3Q9JIY8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cml3Q9JIY8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cml3Q9JIY8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cml3Q9JIY8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cml3Q9JIY8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cml3Q9JIY8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cml3Q9JIY8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Cml3Q9JIY8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cml3Q9JIY8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cml3Q9JIY8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cml3Q9JIY8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cml3Q9JIY8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cml3Q9JIY8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cml3Q9JIY8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cml3Q9JIY8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.06■□□□□ 0.48
Cml3Q9JIY8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.06■□□□□ 0.48
Cml3Q9JIY8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cml3Q9JIY8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cml3Q9JIY8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cml3Q9JIY8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cml3Q9JIY8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
Cml3Q9JIY8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cml3Q9JIY8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cml3Q9JIY8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cml3Q9JIY8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cml3Q9JIY8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cml3Q9JIY8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cml3Q9JIY8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cml3Q9JIY8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cml3Q9JIY8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cml3Q9JIY8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cml3Q9JIY8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Cml3Q9JIY8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cml3Q9JIY8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cml3Q9JIY8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cml3Q9JIY8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cml3Q9JIY8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cml3Q9JIY8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cml3Q9JIY8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.01■□□□□ 0.47
Cml3Q9JIY8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cml3Q9JIY8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cml3Q9JIY8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cml3Q9JIY8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
Cml3Q9JIY8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cml3Q9JIY8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cml3Q9JIY8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cml3Q9JIY8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cml3Q9JIY8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cml3Q9JIY8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cml3Q9JIY8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cml3Q9JIY8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cml3Q9JIY8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cml3Q9JIY8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cml3Q9JIY8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cml3Q9JIY8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cml3Q9JIY8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cml3Q9JIY8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cml3Q9JIY8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
Cml3Q9JIY8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cml3Q9JIY8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cml3Q9JIY8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cml3Q9JIY8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cml3Q9JIY8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Cml3Q9JIY8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cml3Q9JIY8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cml3Q9JIY8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cml3Q9JIY8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Cml3Q9JIY8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cml3Q9JIY8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cml3Q9JIY8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cml3Q9JIY8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cml3Q9JIY8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cml3Q9JIY8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cml3Q9JIY8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cml3Q9JIY8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cml3Q9JIY8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cml3Q9JIY8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.92■□□□□ 0.46
Cml3Q9JIY8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.92■□□□□ 0.46
Cml3Q9JIY8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cml3Q9JIY8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cml3Q9JIY8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cml3Q9JIY8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cml3Q9JIY8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.91■□□□□ 0.46
Cml3Q9JIY8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cml3Q9JIY8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cml3Q9JIY8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.9■□□□□ 0.46
Cml3Q9JIY8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cml3Q9JIY8 Gm24804-201ENSMUST00000174982 85 ntBASIC17.9■□□□□ 0.46
Cml3Q9JIY8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cml3Q9JIY8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cml3Q9JIY8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.9■□□□□ 0.46
Cml3Q9JIY8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cml3Q9JIY8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cml3Q9JIY8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cml3Q9JIY8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cml3Q9JIY8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Cml3Q9JIY8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cml3Q9JIY8 Gm16148-201ENSMUST00000119653 893 ntBASIC17.89■□□□□ 0.45
Cml3Q9JIY8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms