Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rhox4bQ9JI43 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rhox4bQ9JI43 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rhox4bQ9JI43 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rhox4bQ9JI43 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rhox4bQ9JI43 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Rhox4bQ9JI43 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Rhox4bQ9JI43 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rhox4bQ9JI43 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rhox4bQ9JI43 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rhox4bQ9JI43 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19■□□□□ 0.63
Rhox4bQ9JI43 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rhox4bQ9JI43 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rhox4bQ9JI43 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Rhox4bQ9JI43 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rhox4bQ9JI43 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rhox4bQ9JI43 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rhox4bQ9JI43 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rhox4bQ9JI43 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rhox4bQ9JI43 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rhox4bQ9JI43 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rhox4bQ9JI43 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rhox4bQ9JI43 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rhox4bQ9JI43 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rhox4bQ9JI43 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rhox4bQ9JI43 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rhox4bQ9JI43 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rhox4bQ9JI43 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rhox4bQ9JI43 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rhox4bQ9JI43 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.97■□□□□ 0.63
Rhox4bQ9JI43 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rhox4bQ9JI43 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rhox4bQ9JI43 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rhox4bQ9JI43 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rhox4bQ9JI43 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rhox4bQ9JI43 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rhox4bQ9JI43 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rhox4bQ9JI43 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.95■□□□□ 0.62
Rhox4bQ9JI43 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.95■□□□□ 0.62
Rhox4bQ9JI43 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rhox4bQ9JI43 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.95■□□□□ 0.62
Rhox4bQ9JI43 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rhox4bQ9JI43 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rhox4bQ9JI43 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Rhox4bQ9JI43 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rhox4bQ9JI43 Gm25262-201ENSMUST00000174934 133 ntBASIC18.94■□□□□ 0.62
Rhox4bQ9JI43 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rhox4bQ9JI43 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rhox4bQ9JI43 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rhox4bQ9JI43 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rhox4bQ9JI43 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rhox4bQ9JI43 Gm27322-201ENSMUST00000184007 104 ntBASIC18.93■□□□□ 0.62
Rhox4bQ9JI43 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
Rhox4bQ9JI43 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rhox4bQ9JI43 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rhox4bQ9JI43 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
Rhox4bQ9JI43 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.92■□□□□ 0.62
Rhox4bQ9JI43 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rhox4bQ9JI43 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Rhox4bQ9JI43 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rhox4bQ9JI43 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rhox4bQ9JI43 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rhox4bQ9JI43 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Rhox4bQ9JI43 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.62
Rhox4bQ9JI43 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rhox4bQ9JI43 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rhox4bQ9JI43 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rhox4bQ9JI43 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.89■□□□□ 0.61
Rhox4bQ9JI43 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rhox4bQ9JI43 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rhox4bQ9JI43 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.88■□□□□ 0.61
Rhox4bQ9JI43 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rhox4bQ9JI43 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Rhox4bQ9JI43 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rhox4bQ9JI43 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.87■□□□□ 0.61
Rhox4bQ9JI43 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.87■□□□□ 0.61
Rhox4bQ9JI43 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.87■□□□□ 0.61
Rhox4bQ9JI43 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rhox4bQ9JI43 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rhox4bQ9JI43 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhox4bQ9JI43 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhox4bQ9JI43 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rhox4bQ9JI43 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.86■□□□□ 0.61
Rhox4bQ9JI43 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhox4bQ9JI43 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhox4bQ9JI43 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhox4bQ9JI43 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rhox4bQ9JI43 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rhox4bQ9JI43 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Rhox4bQ9JI43 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rhox4bQ9JI43 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.84■□□□□ 0.61
Rhox4bQ9JI43 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rhox4bQ9JI43 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Rhox4bQ9JI43 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.83■□□□□ 0.61
Rhox4bQ9JI43 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rhox4bQ9JI43 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.83■□□□□ 0.6
Rhox4bQ9JI43 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Rhox4bQ9JI43 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rhox4bQ9JI43 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rhox4bQ9JI43 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms