Protein–RNA interactions for Protein: Q9JHL1

Slc9a3r2, Na(+)/H(+) exchange regulatory cofactor NHE-RF2, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r2Q9JHL1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Slc9a3r2Q9JHL1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc9a3r2Q9JHL1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.52■■□□□ 1.04
Slc9a3r2Q9JHL1 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.52■■□□□ 1.04
Slc9a3r2Q9JHL1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.51■■□□□ 1.03
Slc9a3r2Q9JHL1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Slc9a3r2Q9JHL1 Gm9397-201ENSMUST00000200125 605 ntBASIC21.5■■□□□ 1.03
Slc9a3r2Q9JHL1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Slc9a3r2Q9JHL1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Slc9a3r2Q9JHL1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Slc9a3r2Q9JHL1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Slc9a3r2Q9JHL1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc9a3r2Q9JHL1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.49■■□□□ 1.03
Slc9a3r2Q9JHL1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc9a3r2Q9JHL1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Slc9a3r2Q9JHL1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Slc9a3r2Q9JHL1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Slc9a3r2Q9JHL1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Slc9a3r2Q9JHL1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Slc9a3r2Q9JHL1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
Slc9a3r2Q9JHL1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.46■■□□□ 1.03
Slc9a3r2Q9JHL1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Slc9a3r2Q9JHL1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Slc9a3r2Q9JHL1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc9a3r2Q9JHL1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Slc9a3r2Q9JHL1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Slc9a3r2Q9JHL1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc9a3r2Q9JHL1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a3r2Q9JHL1 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.44■■□□□ 1.02
Slc9a3r2Q9JHL1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a3r2Q9JHL1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a3r2Q9JHL1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Slc9a3r2Q9JHL1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc9a3r2Q9JHL1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc9a3r2Q9JHL1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc9a3r2Q9JHL1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc9a3r2Q9JHL1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Slc9a3r2Q9JHL1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc9a3r2Q9JHL1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc9a3r2Q9JHL1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc9a3r2Q9JHL1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Slc9a3r2Q9JHL1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc9a3r2Q9JHL1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.41■■□□□ 1.02
Slc9a3r2Q9JHL1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.41■■□□□ 1.02
Slc9a3r2Q9JHL1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc9a3r2Q9JHL1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc9a3r2Q9JHL1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc9a3r2Q9JHL1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc9a3r2Q9JHL1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Slc9a3r2Q9JHL1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc9a3r2Q9JHL1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc9a3r2Q9JHL1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.39■■□□□ 1.02
Slc9a3r2Q9JHL1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.02
Slc9a3r2Q9JHL1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc9a3r2Q9JHL1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Slc9a3r2Q9JHL1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc9a3r2Q9JHL1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Slc9a3r2Q9JHL1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc9a3r2Q9JHL1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.37■■□□□ 1.01
Slc9a3r2Q9JHL1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc9a3r2Q9JHL1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.36■■□□□ 1.01
Slc9a3r2Q9JHL1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Slc9a3r2Q9JHL1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Slc9a3r2Q9JHL1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc9a3r2Q9JHL1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc9a3r2Q9JHL1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc9a3r2Q9JHL1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc9a3r2Q9JHL1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc9a3r2Q9JHL1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc9a3r2Q9JHL1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc9a3r2Q9JHL1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc9a3r2Q9JHL1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Slc9a3r2Q9JHL1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc9a3r2Q9JHL1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc9a3r2Q9JHL1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.34■■□□□ 1.01
Slc9a3r2Q9JHL1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.33■■□□□ 1.01
Slc9a3r2Q9JHL1 Gm24970-201ENSMUST00000175582 82 ntBASIC21.33■■□□□ 1.01
Slc9a3r2Q9JHL1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc9a3r2Q9JHL1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.32■■□□□ 1
Slc9a3r2Q9JHL1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Slc9a3r2Q9JHL1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.32■■□□□ 1
Slc9a3r2Q9JHL1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.31■■□□□ 1
Slc9a3r2Q9JHL1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.31■■□□□ 1
Slc9a3r2Q9JHL1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Slc9a3r2Q9JHL1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.31■■□□□ 1
Slc9a3r2Q9JHL1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slc9a3r2Q9JHL1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.31■■□□□ 1
Slc9a3r2Q9JHL1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc9a3r2Q9JHL1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc9a3r2Q9JHL1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
Slc9a3r2Q9JHL1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc9a3r2Q9JHL1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Slc9a3r2Q9JHL1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Slc9a3r2Q9JHL1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc9a3r2Q9JHL1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc9a3r2Q9JHL1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc9a3r2Q9JHL1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc9a3r2Q9JHL1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc9a3r2Q9JHL1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.27■■□□□ 1
Slc9a3r2Q9JHL1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms