Protein–RNA interactions for Protein: Q9ESJ4

Nckipsd, NCK-interacting protein with SH3 domain, mousemouse

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NckipsdQ9ESJ4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
NckipsdQ9ESJ4 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.26■■□□□ 1.63
NckipsdQ9ESJ4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
NckipsdQ9ESJ4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
NckipsdQ9ESJ4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.25■■□□□ 1.63
NckipsdQ9ESJ4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
NckipsdQ9ESJ4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
NckipsdQ9ESJ4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
NckipsdQ9ESJ4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
NckipsdQ9ESJ4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NckipsdQ9ESJ4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NckipsdQ9ESJ4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NckipsdQ9ESJ4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
NckipsdQ9ESJ4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
NckipsdQ9ESJ4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NckipsdQ9ESJ4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NckipsdQ9ESJ4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NckipsdQ9ESJ4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
NckipsdQ9ESJ4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NckipsdQ9ESJ4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NckipsdQ9ESJ4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NckipsdQ9ESJ4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.18■■□□□ 1.62
NckipsdQ9ESJ4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NckipsdQ9ESJ4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.17■■□□□ 1.62
NckipsdQ9ESJ4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.17■■□□□ 1.62
NckipsdQ9ESJ4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
NckipsdQ9ESJ4 Zxda-201ENSMUST00000117281 2621 ntBASIC25.15■■□□□ 1.62
NckipsdQ9ESJ4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
NckipsdQ9ESJ4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NckipsdQ9ESJ4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
NckipsdQ9ESJ4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NckipsdQ9ESJ4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NckipsdQ9ESJ4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NckipsdQ9ESJ4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NckipsdQ9ESJ4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.1■■□□□ 1.61
NckipsdQ9ESJ4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
NckipsdQ9ESJ4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.1■■□□□ 1.61
NckipsdQ9ESJ4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NckipsdQ9ESJ4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NckipsdQ9ESJ4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.09■■□□□ 1.61
NckipsdQ9ESJ4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NckipsdQ9ESJ4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NckipsdQ9ESJ4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.08■■□□□ 1.61
NckipsdQ9ESJ4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
NckipsdQ9ESJ4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
NckipsdQ9ESJ4 Particl-201ENSMUST00000205370 1560 ntBASIC25.07■■□□□ 1.6
NckipsdQ9ESJ4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.07■■□□□ 1.6
NckipsdQ9ESJ4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
NckipsdQ9ESJ4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NckipsdQ9ESJ4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NckipsdQ9ESJ4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NckipsdQ9ESJ4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.03■■□□□ 1.6
NckipsdQ9ESJ4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.03■■□□□ 1.6
NckipsdQ9ESJ4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NckipsdQ9ESJ4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
NckipsdQ9ESJ4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.01■■□□□ 1.59
NckipsdQ9ESJ4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
NckipsdQ9ESJ4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
NckipsdQ9ESJ4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
NckipsdQ9ESJ4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NckipsdQ9ESJ4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
NckipsdQ9ESJ4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
NckipsdQ9ESJ4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
NckipsdQ9ESJ4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
NckipsdQ9ESJ4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.96■■□□□ 1.59
NckipsdQ9ESJ4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
NckipsdQ9ESJ4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
NckipsdQ9ESJ4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
NckipsdQ9ESJ4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
NckipsdQ9ESJ4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
NckipsdQ9ESJ4 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.95■■□□□ 1.58
NckipsdQ9ESJ4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
NckipsdQ9ESJ4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
NckipsdQ9ESJ4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NckipsdQ9ESJ4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NckipsdQ9ESJ4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
NckipsdQ9ESJ4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NckipsdQ9ESJ4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
NckipsdQ9ESJ4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NckipsdQ9ESJ4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
NckipsdQ9ESJ4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.91■■□□□ 1.58
NckipsdQ9ESJ4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NckipsdQ9ESJ4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
NckipsdQ9ESJ4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.91■■□□□ 1.58
NckipsdQ9ESJ4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
NckipsdQ9ESJ4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
NckipsdQ9ESJ4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NckipsdQ9ESJ4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
NckipsdQ9ESJ4 Gm6311-201ENSMUST00000073790 878 ntBASIC24.87■■□□□ 1.57
NckipsdQ9ESJ4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
NckipsdQ9ESJ4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
NckipsdQ9ESJ4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.86■■□□□ 1.57
NckipsdQ9ESJ4 Gm11175-201ENSMUST00000116172 543 ntBASIC24.86■■□□□ 1.57
NckipsdQ9ESJ4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
NckipsdQ9ESJ4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
NckipsdQ9ESJ4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.84■■□□□ 1.57
NckipsdQ9ESJ4 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.84■■□□□ 1.57
NckipsdQ9ESJ4 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.84■■□□□ 1.57
NckipsdQ9ESJ4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.83■■□□□ 1.57
NckipsdQ9ESJ4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms