Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hcfc1r1Q9CYQ5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Hcfc1r1Q9CYQ5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hcfc1r1Q9CYQ5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hcfc1r1Q9CYQ5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hcfc1r1Q9CYQ5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hcfc1r1Q9CYQ5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hcfc1r1Q9CYQ5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hcfc1r1Q9CYQ5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hcfc1r1Q9CYQ5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hcfc1r1Q9CYQ5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.64■□□□□ 0.89
Hcfc1r1Q9CYQ5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Hcfc1r1Q9CYQ5 Gm8109-201ENSMUST00000194076 746 ntBASIC20.64■□□□□ 0.89
Hcfc1r1Q9CYQ5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.64■□□□□ 0.89
Hcfc1r1Q9CYQ5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hcfc1r1Q9CYQ5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.64■□□□□ 0.89
Hcfc1r1Q9CYQ5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hcfc1r1Q9CYQ5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hcfc1r1Q9CYQ5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hcfc1r1Q9CYQ5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hcfc1r1Q9CYQ5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hcfc1r1Q9CYQ5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hcfc1r1Q9CYQ5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hcfc1r1Q9CYQ5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hcfc1r1Q9CYQ5 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hcfc1r1Q9CYQ5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hcfc1r1Q9CYQ5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hcfc1r1Q9CYQ5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hcfc1r1Q9CYQ5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hcfc1r1Q9CYQ5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hcfc1r1Q9CYQ5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.59■□□□□ 0.89
Hcfc1r1Q9CYQ5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hcfc1r1Q9CYQ5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Hcfc1r1Q9CYQ5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Hcfc1r1Q9CYQ5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hcfc1r1Q9CYQ5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hcfc1r1Q9CYQ5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hcfc1r1Q9CYQ5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hcfc1r1Q9CYQ5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Hcfc1r1Q9CYQ5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hcfc1r1Q9CYQ5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hcfc1r1Q9CYQ5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hcfc1r1Q9CYQ5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hcfc1r1Q9CYQ5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hcfc1r1Q9CYQ5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hcfc1r1Q9CYQ5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hcfc1r1Q9CYQ5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hcfc1r1Q9CYQ5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hcfc1r1Q9CYQ5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hcfc1r1Q9CYQ5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hcfc1r1Q9CYQ5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hcfc1r1Q9CYQ5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hcfc1r1Q9CYQ5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hcfc1r1Q9CYQ5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hcfc1r1Q9CYQ5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.53■□□□□ 0.88
Hcfc1r1Q9CYQ5 Gm26115-201ENSMUST00000175605 87 ntBASIC20.53■□□□□ 0.88
Hcfc1r1Q9CYQ5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hcfc1r1Q9CYQ5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Hcfc1r1Q9CYQ5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hcfc1r1Q9CYQ5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hcfc1r1Q9CYQ5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Hcfc1r1Q9CYQ5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hcfc1r1Q9CYQ5 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.52■□□□□ 0.88
Hcfc1r1Q9CYQ5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hcfc1r1Q9CYQ5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Hcfc1r1Q9CYQ5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hcfc1r1Q9CYQ5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hcfc1r1Q9CYQ5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.5■□□□□ 0.87
Hcfc1r1Q9CYQ5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hcfc1r1Q9CYQ5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Hcfc1r1Q9CYQ5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Hcfc1r1Q9CYQ5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hcfc1r1Q9CYQ5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hcfc1r1Q9CYQ5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Hcfc1r1Q9CYQ5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.48■□□□□ 0.87
Hcfc1r1Q9CYQ5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hcfc1r1Q9CYQ5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hcfc1r1Q9CYQ5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hcfc1r1Q9CYQ5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hcfc1r1Q9CYQ5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hcfc1r1Q9CYQ5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hcfc1r1Q9CYQ5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Hcfc1r1Q9CYQ5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hcfc1r1Q9CYQ5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hcfc1r1Q9CYQ5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hcfc1r1Q9CYQ5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hcfc1r1Q9CYQ5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Hcfc1r1Q9CYQ5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Hcfc1r1Q9CYQ5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.43■□□□□ 0.86
Hcfc1r1Q9CYQ5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcfc1r1Q9CYQ5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcfc1r1Q9CYQ5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Hcfc1r1Q9CYQ5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hcfc1r1Q9CYQ5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.41■□□□□ 0.86
Hcfc1r1Q9CYQ5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hcfc1r1Q9CYQ5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcfc1r1Q9CYQ5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hcfc1r1Q9CYQ5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hcfc1r1Q9CYQ5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hcfc1r1Q9CYQ5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms