Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27,43■■□□□ 1,98
Smc1bQ920F6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27,42■■□□□ 1,98
Smc1bQ920F6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27,42■■□□□ 1,98
Smc1bQ920F6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27,41■■□□□ 1,98
Smc1bQ920F6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27,41■■□□□ 1,98
Smc1bQ920F6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27,4■■□□□ 1,98
Smc1bQ920F6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27,39■■□□□ 1,98
Smc1bQ920F6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27,39■■□□□ 1,98
Smc1bQ920F6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27,39■■□□□ 1,98
Smc1bQ920F6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27,39■■□□□ 1,98
Smc1bQ920F6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27,39■■□□□ 1,97
Smc1bQ920F6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC27,38■■□□□ 1,97
Smc1bQ920F6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27,37■■□□□ 1,97
Smc1bQ920F6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27,37■■□□□ 1,97
Smc1bQ920F6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27,37■■□□□ 1,97
Smc1bQ920F6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27,35■■□□□ 1,97
Smc1bQ920F6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27,35■■□□□ 1,97
Smc1bQ920F6 Gm6311-201ENSMUST00000073790 878 ntBASIC27,34■■□□□ 1,97
Smc1bQ920F6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27,34■■□□□ 1,97
Smc1bQ920F6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC27,34■■□□□ 1,97
Smc1bQ920F6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27,34■■□□□ 1,97
Smc1bQ920F6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27,33■■□□□ 1,96
Smc1bQ920F6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27,32■■□□□ 1,96
Smc1bQ920F6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27,32■■□□□ 1,96
Smc1bQ920F6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27,31■■□□□ 1,96
Smc1bQ920F6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27,31■■□□□ 1,96
Smc1bQ920F6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC27,3■■□□□ 1,96
Smc1bQ920F6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27,29■■□□□ 1,96
Smc1bQ920F6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27,29■■□□□ 1,96
Smc1bQ920F6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27,28■■□□□ 1,96
Smc1bQ920F6 Amer2-203ENSMUST00000225247 2662 ntBASIC27,28■■□□□ 1,96
Smc1bQ920F6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27,28■■□□□ 1,96
Smc1bQ920F6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC27,28■■□□□ 1,96
Smc1bQ920F6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27,26■■□□□ 1,95
Smc1bQ920F6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27,26■■□□□ 1,95
Smc1bQ920F6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27,25■■□□□ 1,95
Smc1bQ920F6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27,25■■□□□ 1,95
Smc1bQ920F6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27,25■■□□□ 1,95
Smc1bQ920F6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC27,25■■□□□ 1,95
Smc1bQ920F6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27,24■■□□□ 1,95
Smc1bQ920F6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC27,24■■□□□ 1,95
Smc1bQ920F6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27,24■■□□□ 1,95
Smc1bQ920F6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27,24■■□□□ 1,95
Smc1bQ920F6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27,23■■□□□ 1,95
Smc1bQ920F6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27,23■■□□□ 1,95
Smc1bQ920F6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27,22■■□□□ 1,95
Smc1bQ920F6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27,22■■□□□ 1,95
Smc1bQ920F6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27,22■■□□□ 1,95
Smc1bQ920F6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27,2■■□□□ 1,94
Smc1bQ920F6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27,19■■□□□ 1,94
Smc1bQ920F6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27,19■■□□□ 1,94
Smc1bQ920F6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27,18■■□□□ 1,94
Smc1bQ920F6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27,18■■□□□ 1,94
Smc1bQ920F6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27,18■■□□□ 1,94
Smc1bQ920F6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27,18■■□□□ 1,94
Smc1bQ920F6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27,16■■□□□ 1,94
Smc1bQ920F6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27,16■■□□□ 1,94
Smc1bQ920F6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27,16■■□□□ 1,94
Smc1bQ920F6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27,15■■□□□ 1,94
Smc1bQ920F6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27,15■■□□□ 1,94
Smc1bQ920F6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27,14■■□□□ 1,94
Smc1bQ920F6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27,13■■□□□ 1,93
Smc1bQ920F6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27,13■■□□□ 1,93
Smc1bQ920F6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27,12■■□□□ 1,93
Smc1bQ920F6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27,12■■□□□ 1,93
Smc1bQ920F6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27,11■■□□□ 1,93
Smc1bQ920F6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC27,11■■□□□ 1,93
Smc1bQ920F6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC27,11■■□□□ 1,93
Smc1bQ920F6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27,11■■□□□ 1,93
Smc1bQ920F6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27,11■■□□□ 1,93
Smc1bQ920F6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27,1■■□□□ 1,93
Smc1bQ920F6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27,1■■□□□ 1,93
Smc1bQ920F6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27,1■■□□□ 1,93
Smc1bQ920F6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27,09■■□□□ 1,93
Smc1bQ920F6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27,09■■□□□ 1,93
Smc1bQ920F6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27,09■■□□□ 1,93
Smc1bQ920F6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27,09■■□□□ 1,93
Smc1bQ920F6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27,09■■□□□ 1,93
Smc1bQ920F6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC27,09■■□□□ 1,93
Smc1bQ920F6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27,08■■□□□ 1,93
Smc1bQ920F6 Gm6345-201ENSMUST00000180378 1691 ntBASIC27,08■■□□□ 1,92
Smc1bQ920F6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27,08■■□□□ 1,92
Smc1bQ920F6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC27,07■■□□□ 1,92
Smc1bQ920F6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC27,07■■□□□ 1,92
Smc1bQ920F6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27,07■■□□□ 1,92
Smc1bQ920F6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC27,06■■□□□ 1,92
Smc1bQ920F6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27,05■■□□□ 1,92
Smc1bQ920F6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27,05■■□□□ 1,92
Smc1bQ920F6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC27,03■■□□□ 1,92
Smc1bQ920F6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27,03■■□□□ 1,92
Smc1bQ920F6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27,03■■□□□ 1,92
Smc1bQ920F6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27,03■■□□□ 1,92
Smc1bQ920F6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27,01■■□□□ 1,91
Smc1bQ920F6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27,01■■□□□ 1,91
Smc1bQ920F6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27,01■■□□□ 1,91
Smc1bQ920F6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27,01■■□□□ 1,91
Smc1bQ920F6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26,99■■□□□ 1,91
Smc1bQ920F6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26,98■■□□□ 1,91
Smc1bQ920F6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26,97■■□□□ 1,91
Smc1bQ920F6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26,97■■□□□ 1,91
Retrieved 100 of 76,532 protein–RNA pairs in 22,8 ms