Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
Pcdh18Q8VHR0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdh18Q8VHR0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh18Q8VHR0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.78■■□□□ 1.24
Pcdh18Q8VHR0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh18Q8VHR0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh18Q8VHR0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.77■■□□□ 1.24
Pcdh18Q8VHR0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh18Q8VHR0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh18Q8VHR0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh18Q8VHR0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh18Q8VHR0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh18Q8VHR0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh18Q8VHR0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh18Q8VHR0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdh18Q8VHR0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Pcdh18Q8VHR0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Pcdh18Q8VHR0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh18Q8VHR0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Pcdh18Q8VHR0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh18Q8VHR0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
Pcdh18Q8VHR0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdh18Q8VHR0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Pcdh18Q8VHR0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdh18Q8VHR0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdh18Q8VHR0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdh18Q8VHR0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Pcdh18Q8VHR0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Pcdh18Q8VHR0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Pcdh18Q8VHR0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.7■■□□□ 1.22
Pcdh18Q8VHR0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdh18Q8VHR0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdh18Q8VHR0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Pcdh18Q8VHR0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh18Q8VHR0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh18Q8VHR0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh18Q8VHR0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
Pcdh18Q8VHR0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdh18Q8VHR0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Pcdh18Q8VHR0 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.68■■□□□ 1.22
Pcdh18Q8VHR0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdh18Q8VHR0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdh18Q8VHR0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.67■■□□□ 1.22
Pcdh18Q8VHR0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdh18Q8VHR0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdh18Q8VHR0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh18Q8VHR0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh18Q8VHR0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.65■■□□□ 1.22
Pcdh18Q8VHR0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Pcdh18Q8VHR0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdh18Q8VHR0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdh18Q8VHR0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdh18Q8VHR0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Pcdh18Q8VHR0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdh18Q8VHR0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdh18Q8VHR0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdh18Q8VHR0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdh18Q8VHR0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh18Q8VHR0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh18Q8VHR0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh18Q8VHR0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh18Q8VHR0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.62■■□□□ 1.21
Pcdh18Q8VHR0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh18Q8VHR0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdh18Q8VHR0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.61■■□□□ 1.21
Pcdh18Q8VHR0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdh18Q8VHR0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdh18Q8VHR0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdh18Q8VHR0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
Pcdh18Q8VHR0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdh18Q8VHR0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdh18Q8VHR0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdh18Q8VHR0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdh18Q8VHR0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdh18Q8VHR0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdh18Q8VHR0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdh18Q8VHR0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdh18Q8VHR0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdh18Q8VHR0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdh18Q8VHR0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdh18Q8VHR0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Pcdh18Q8VHR0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdh18Q8VHR0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdh18Q8VHR0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdh18Q8VHR0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdh18Q8VHR0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.55■■□□□ 1.2
Pcdh18Q8VHR0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdh18Q8VHR0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Pcdh18Q8VHR0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdh18Q8VHR0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.54■■□□□ 1.2
Pcdh18Q8VHR0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdh18Q8VHR0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdh18Q8VHR0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdh18Q8VHR0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdh18Q8VHR0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.53■■□□□ 1.2
Pcdh18Q8VHR0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Pcdh18Q8VHR0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh18Q8VHR0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdh18Q8VHR0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.51■■□□□ 1.19
Pcdh18Q8VHR0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms