Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ssx2ipQ8VC66 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.22■■□□□ 1.47
Ssx2ipQ8VC66 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ssx2ipQ8VC66 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ssx2ipQ8VC66 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ssx2ipQ8VC66 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.21■■□□□ 1.47
Ssx2ipQ8VC66 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ssx2ipQ8VC66 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Ssx2ipQ8VC66 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ssx2ipQ8VC66 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Ssx2ipQ8VC66 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ssx2ipQ8VC66 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ssx2ipQ8VC66 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ssx2ipQ8VC66 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ssx2ipQ8VC66 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ssx2ipQ8VC66 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ssx2ipQ8VC66 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ssx2ipQ8VC66 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Ssx2ipQ8VC66 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Ssx2ipQ8VC66 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Ssx2ipQ8VC66 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Ssx2ipQ8VC66 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ssx2ipQ8VC66 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ssx2ipQ8VC66 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ssx2ipQ8VC66 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ssx2ipQ8VC66 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ssx2ipQ8VC66 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ssx2ipQ8VC66 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ssx2ipQ8VC66 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ssx2ipQ8VC66 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ssx2ipQ8VC66 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ssx2ipQ8VC66 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Ssx2ipQ8VC66 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Ssx2ipQ8VC66 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Ssx2ipQ8VC66 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Ssx2ipQ8VC66 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ssx2ipQ8VC66 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Ssx2ipQ8VC66 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ssx2ipQ8VC66 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ssx2ipQ8VC66 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.13■■□□□ 1.45
Ssx2ipQ8VC66 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Ssx2ipQ8VC66 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ssx2ipQ8VC66 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ssx2ipQ8VC66 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.12■■□□□ 1.45
Ssx2ipQ8VC66 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.12■■□□□ 1.45
Ssx2ipQ8VC66 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ssx2ipQ8VC66 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Ssx2ipQ8VC66 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Ssx2ipQ8VC66 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ssx2ipQ8VC66 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Ssx2ipQ8VC66 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.08■■□□□ 1.44
Ssx2ipQ8VC66 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ssx2ipQ8VC66 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ssx2ipQ8VC66 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Ssx2ipQ8VC66 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Ssx2ipQ8VC66 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ssx2ipQ8VC66 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ssx2ipQ8VC66 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ssx2ipQ8VC66 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Ssx2ipQ8VC66 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC24.05■■□□□ 1.44
Ssx2ipQ8VC66 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ssx2ipQ8VC66 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ssx2ipQ8VC66 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
Ssx2ipQ8VC66 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.04■■□□□ 1.44
Ssx2ipQ8VC66 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.04■■□□□ 1.44
Ssx2ipQ8VC66 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ssx2ipQ8VC66 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ssx2ipQ8VC66 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Ssx2ipQ8VC66 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ssx2ipQ8VC66 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Ssx2ipQ8VC66 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ssx2ipQ8VC66 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Ssx2ipQ8VC66 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ssx2ipQ8VC66 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ssx2ipQ8VC66 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ssx2ipQ8VC66 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ssx2ipQ8VC66 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ssx2ipQ8VC66 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ssx2ipQ8VC66 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Ssx2ipQ8VC66 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ssx2ipQ8VC66 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ssx2ipQ8VC66 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ssx2ipQ8VC66 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ssx2ipQ8VC66 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ssx2ipQ8VC66 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.98■■□□□ 1.43
Ssx2ipQ8VC66 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ssx2ipQ8VC66 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ssx2ipQ8VC66 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.96■■□□□ 1.43
Ssx2ipQ8VC66 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Ssx2ipQ8VC66 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ssx2ipQ8VC66 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ssx2ipQ8VC66 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ssx2ipQ8VC66 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ssx2ipQ8VC66 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.94■■□□□ 1.42
Ssx2ipQ8VC66 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ssx2ipQ8VC66 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ssx2ipQ8VC66 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ssx2ipQ8VC66 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Ssx2ipQ8VC66 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ssx2ipQ8VC66 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms