Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
Atp2a1Q8R429 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
Atp2a1Q8R429 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
Atp2a1Q8R429 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Atp2a1Q8R429 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
Atp2a1Q8R429 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
Atp2a1Q8R429 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Atp2a1Q8R429 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.93■■□□□ 1.9
Atp2a1Q8R429 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.92■■□□□ 1.9
Atp2a1Q8R429 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Atp2a1Q8R429 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Atp2a1Q8R429 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Atp2a1Q8R429 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Atp2a1Q8R429 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.9■■□□□ 1.9
Atp2a1Q8R429 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.89■■□□□ 1.9
Atp2a1Q8R429 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Atp2a1Q8R429 Gm30023-201ENSMUST00000197970 889 ntBASIC26.87■■□□□ 1.89
Atp2a1Q8R429 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Atp2a1Q8R429 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Atp2a1Q8R429 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Atp2a1Q8R429 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.86■■□□□ 1.89
Atp2a1Q8R429 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Atp2a1Q8R429 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Atp2a1Q8R429 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.85■■□□□ 1.89
Atp2a1Q8R429 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Atp2a1Q8R429 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Atp2a1Q8R429 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Atp2a1Q8R429 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Atp2a1Q8R429 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.81■■□□□ 1.88
Atp2a1Q8R429 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Atp2a1Q8R429 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Atp2a1Q8R429 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Atp2a1Q8R429 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Atp2a1Q8R429 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Atp2a1Q8R429 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Atp2a1Q8R429 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.77■■□□□ 1.88
Atp2a1Q8R429 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.77■■□□□ 1.88
Atp2a1Q8R429 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Atp2a1Q8R429 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.76■■□□□ 1.87
Atp2a1Q8R429 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Atp2a1Q8R429 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Atp2a1Q8R429 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Atp2a1Q8R429 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Atp2a1Q8R429 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Atp2a1Q8R429 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Atp2a1Q8R429 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Atp2a1Q8R429 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Atp2a1Q8R429 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Atp2a1Q8R429 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.72■■□□□ 1.87
Atp2a1Q8R429 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
Atp2a1Q8R429 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Atp2a1Q8R429 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.71■■□□□ 1.87
Atp2a1Q8R429 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Atp2a1Q8R429 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.7■■□□□ 1.86
Atp2a1Q8R429 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Atp2a1Q8R429 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Atp2a1Q8R429 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Atp2a1Q8R429 Particl-201ENSMUST00000205370 1560 ntBASIC26.67■■□□□ 1.86
Atp2a1Q8R429 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Atp2a1Q8R429 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Atp2a1Q8R429 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Atp2a1Q8R429 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Atp2a1Q8R429 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Atp2a1Q8R429 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
Atp2a1Q8R429 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.63■■□□□ 1.85
Atp2a1Q8R429 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Atp2a1Q8R429 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Atp2a1Q8R429 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
Atp2a1Q8R429 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Atp2a1Q8R429 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Atp2a1Q8R429 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.61■■□□□ 1.85
Atp2a1Q8R429 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
Atp2a1Q8R429 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.6■■□□□ 1.85
Atp2a1Q8R429 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
Atp2a1Q8R429 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Atp2a1Q8R429 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Atp2a1Q8R429 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Atp2a1Q8R429 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Atp2a1Q8R429 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Atp2a1Q8R429 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
Atp2a1Q8R429 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Atp2a1Q8R429 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Atp2a1Q8R429 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Atp2a1Q8R429 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.57■■□□□ 1.84
Atp2a1Q8R429 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Atp2a1Q8R429 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.56■■□□□ 1.84
Atp2a1Q8R429 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Atp2a1Q8R429 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
Atp2a1Q8R429 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Atp2a1Q8R429 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Atp2a1Q8R429 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
Atp2a1Q8R429 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Atp2a1Q8R429 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Atp2a1Q8R429 Gm11175-201ENSMUST00000116172 543 ntBASIC26.53■■□□□ 1.84
Atp2a1Q8R429 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.53■■□□□ 1.84
Atp2a1Q8R429 Amer2-203ENSMUST00000225247 2662 ntBASIC26.53■■□□□ 1.84
Atp2a1Q8R429 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Atp2a1Q8R429 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.51■■□□□ 1.83
Atp2a1Q8R429 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Atp2a1Q8R429 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms