Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21,45■■□□□ 1,02
Cuedc1Q8R3V6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21,45■■□□□ 1,02
Cuedc1Q8R3V6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21,43■■□□□ 1,02
Cuedc1Q8R3V6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21,43■■□□□ 1,02
Cuedc1Q8R3V6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21,42■■□□□ 1,02
Cuedc1Q8R3V6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21,42■■□□□ 1,02
Cuedc1Q8R3V6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21,41■■□□□ 1,02
Cuedc1Q8R3V6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21,41■■□□□ 1,02
Cuedc1Q8R3V6 Gm6206-201ENSMUST00000133472 2199 ntBASIC21,41■■□□□ 1,02
Cuedc1Q8R3V6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21,4■■□□□ 1,02
Cuedc1Q8R3V6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21,38■■□□□ 1,01
Cuedc1Q8R3V6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21,38■■□□□ 1,01
Cuedc1Q8R3V6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21,38■■□□□ 1,01
Cuedc1Q8R3V6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21,38■■□□□ 1,01
Cuedc1Q8R3V6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21,37■■□□□ 1,01
Cuedc1Q8R3V6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21,36■■□□□ 1,01
Cuedc1Q8R3V6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21,36■■□□□ 1,01
Cuedc1Q8R3V6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21,36■■□□□ 1,01
Cuedc1Q8R3V6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21,36■■□□□ 1,01
Cuedc1Q8R3V6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21,36■■□□□ 1,01
Cuedc1Q8R3V6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21,36■■□□□ 1,01
Cuedc1Q8R3V6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21,36■■□□□ 1,01
Cuedc1Q8R3V6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21,36■■□□□ 1,01
Cuedc1Q8R3V6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21,35■■□□□ 1,01
Cuedc1Q8R3V6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21,35■■□□□ 1,01
Cuedc1Q8R3V6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21,34■■□□□ 1,01
Cuedc1Q8R3V6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21,34■■□□□ 1,01
Cuedc1Q8R3V6 Gm6311-201ENSMUST00000073790 878 ntBASIC21,34■■□□□ 1,01
Cuedc1Q8R3V6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21,33■■□□□ 1,01
Cuedc1Q8R3V6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21,33■■□□□ 1,01
Cuedc1Q8R3V6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21,33■■□□□ 1,01
Cuedc1Q8R3V6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21,33■■□□□ 1,01
Cuedc1Q8R3V6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21,32■■□□□ 1
Cuedc1Q8R3V6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21,32■■□□□ 1
Cuedc1Q8R3V6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21,32■■□□□ 1
Cuedc1Q8R3V6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21,32■■□□□ 1
Cuedc1Q8R3V6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21,32■■□□□ 1
Cuedc1Q8R3V6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Cuedc1Q8R3V6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Cuedc1Q8R3V6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Cuedc1Q8R3V6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21,3■■□□□ 1
Cuedc1Q8R3V6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21,3■■□□□ 1
Cuedc1Q8R3V6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21,3■■□□□ 1
Cuedc1Q8R3V6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21,3■■□□□ 1
Cuedc1Q8R3V6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Cuedc1Q8R3V6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21,29■■□□□ 1
Cuedc1Q8R3V6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21,28■■□□□ 1
Cuedc1Q8R3V6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Cuedc1Q8R3V6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21,27■■□□□ 1
Cuedc1Q8R3V6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21,27■■□□□ 1
Cuedc1Q8R3V6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21,27■■□□□ 1
Cuedc1Q8R3V6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21,27■■□□□ 1
Cuedc1Q8R3V6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21,26■□□□□ 0,99
Cuedc1Q8R3V6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21,26■□□□□ 0,99
Cuedc1Q8R3V6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21,25■□□□□ 0,99
Cuedc1Q8R3V6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21,25■□□□□ 0,99
Cuedc1Q8R3V6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21,25■□□□□ 0,99
Cuedc1Q8R3V6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21,25■□□□□ 0,99
Cuedc1Q8R3V6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21,24■□□□□ 0,99
Cuedc1Q8R3V6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21,24■□□□□ 0,99
Cuedc1Q8R3V6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21,24■□□□□ 0,99
Cuedc1Q8R3V6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21,23■□□□□ 0,99
Cuedc1Q8R3V6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21,23■□□□□ 0,99
Cuedc1Q8R3V6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21,23■□□□□ 0,99
Cuedc1Q8R3V6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21,23■□□□□ 0,99
Cuedc1Q8R3V6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21,22■□□□□ 0,99
Cuedc1Q8R3V6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21,22■□□□□ 0,99
Cuedc1Q8R3V6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21,22■□□□□ 0,99
Cuedc1Q8R3V6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21,22■□□□□ 0,99
Cuedc1Q8R3V6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21,21■□□□□ 0,99
Cuedc1Q8R3V6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21,2■□□□□ 0,98
Cuedc1Q8R3V6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21,2■□□□□ 0,98
Cuedc1Q8R3V6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21,2■□□□□ 0,98
Cuedc1Q8R3V6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21,2■□□□□ 0,98
Cuedc1Q8R3V6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21,2■□□□□ 0,98
Cuedc1Q8R3V6 Gm43445-201ENSMUST00000198564 2091 ntBASIC21,2■□□□□ 0,98
Cuedc1Q8R3V6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21,2■□□□□ 0,98
Cuedc1Q8R3V6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21,2■□□□□ 0,98
Cuedc1Q8R3V6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21,19■□□□□ 0,98
Cuedc1Q8R3V6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21,19■□□□□ 0,98
Cuedc1Q8R3V6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21,19■□□□□ 0,98
Cuedc1Q8R3V6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21,19■□□□□ 0,98
Cuedc1Q8R3V6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21,18■□□□□ 0,98
Cuedc1Q8R3V6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21,18■□□□□ 0,98
Cuedc1Q8R3V6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21,18■□□□□ 0,98
Cuedc1Q8R3V6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21,17■□□□□ 0,98
Cuedc1Q8R3V6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Cuedc1Q8R3V6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21,16■□□□□ 0,98
Cuedc1Q8R3V6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21,16■□□□□ 0,98
Cuedc1Q8R3V6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21,15■□□□□ 0,98
Cuedc1Q8R3V6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21,15■□□□□ 0,98
Cuedc1Q8R3V6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21,15■□□□□ 0,98
Cuedc1Q8R3V6 Gm6345-201ENSMUST00000180378 1691 ntBASIC21,15■□□□□ 0,98
Cuedc1Q8R3V6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21,15■□□□□ 0,98
Cuedc1Q8R3V6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21,15■□□□□ 0,98
Cuedc1Q8R3V6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21,15■□□□□ 0,98
Cuedc1Q8R3V6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21,14■□□□□ 0,98
Cuedc1Q8R3V6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21,14■□□□□ 0,98
Cuedc1Q8R3V6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21,14■□□□□ 0,97
Cuedc1Q8R3V6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21,14■□□□□ 0,97
Retrieved 100 of 76,532 protein–RNA pairs in 10,8 ms