Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trpm6Q8CIR4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.57■■□□□ 1.52
Trpm6Q8CIR4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Trpm6Q8CIR4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Trpm6Q8CIR4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Trpm6Q8CIR4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trpm6Q8CIR4 Gm30023-201ENSMUST00000197970 889 ntBASIC24.55■■□□□ 1.52
Trpm6Q8CIR4 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.55■■□□□ 1.52
Trpm6Q8CIR4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Trpm6Q8CIR4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.54■■□□□ 1.52
Trpm6Q8CIR4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trpm6Q8CIR4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trpm6Q8CIR4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.53■■□□□ 1.52
Trpm6Q8CIR4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trpm6Q8CIR4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trpm6Q8CIR4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trpm6Q8CIR4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Trpm6Q8CIR4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trpm6Q8CIR4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Trpm6Q8CIR4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trpm6Q8CIR4 Gm11175-201ENSMUST00000116172 543 ntBASIC24.5■■□□□ 1.51
Trpm6Q8CIR4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Trpm6Q8CIR4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Trpm6Q8CIR4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trpm6Q8CIR4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.49■■□□□ 1.51
Trpm6Q8CIR4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.49■■□□□ 1.51
Trpm6Q8CIR4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trpm6Q8CIR4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Trpm6Q8CIR4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trpm6Q8CIR4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trpm6Q8CIR4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.46■■□□□ 1.51
Trpm6Q8CIR4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trpm6Q8CIR4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.46■■□□□ 1.51
Trpm6Q8CIR4 Particl-201ENSMUST00000205370 1560 ntBASIC24.46■■□□□ 1.51
Trpm6Q8CIR4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trpm6Q8CIR4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Trpm6Q8CIR4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trpm6Q8CIR4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Trpm6Q8CIR4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trpm6Q8CIR4 Mir6538-201ENSMUST00000183713 110 ntBASIC24.44■■□□□ 1.5
Trpm6Q8CIR4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trpm6Q8CIR4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.43■■□□□ 1.5
Trpm6Q8CIR4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Trpm6Q8CIR4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trpm6Q8CIR4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Trpm6Q8CIR4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Trpm6Q8CIR4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trpm6Q8CIR4 Gm6311-201ENSMUST00000073790 878 ntBASIC24.4■■□□□ 1.5
Trpm6Q8CIR4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Trpm6Q8CIR4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trpm6Q8CIR4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Trpm6Q8CIR4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trpm6Q8CIR4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trpm6Q8CIR4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trpm6Q8CIR4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Trpm6Q8CIR4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.35■■□□□ 1.49
Trpm6Q8CIR4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Trpm6Q8CIR4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Trpm6Q8CIR4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Trpm6Q8CIR4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.32■■□□□ 1.48
Trpm6Q8CIR4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trpm6Q8CIR4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.31■■□□□ 1.48
Trpm6Q8CIR4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.3■■□□□ 1.48
Trpm6Q8CIR4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trpm6Q8CIR4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.3■■□□□ 1.48
Trpm6Q8CIR4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.29■■□□□ 1.48
Trpm6Q8CIR4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trpm6Q8CIR4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
Trpm6Q8CIR4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Trpm6Q8CIR4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Trpm6Q8CIR4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trpm6Q8CIR4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trpm6Q8CIR4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trpm6Q8CIR4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trpm6Q8CIR4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Trpm6Q8CIR4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Trpm6Q8CIR4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.24■■□□□ 1.47
Trpm6Q8CIR4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Trpm6Q8CIR4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trpm6Q8CIR4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trpm6Q8CIR4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Trpm6Q8CIR4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trpm6Q8CIR4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
Trpm6Q8CIR4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.21■■□□□ 1.47
Trpm6Q8CIR4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
Trpm6Q8CIR4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Trpm6Q8CIR4 Zxda-201ENSMUST00000117281 2621 ntBASIC24.2■■□□□ 1.46
Trpm6Q8CIR4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Trpm6Q8CIR4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Trpm6Q8CIR4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trpm6Q8CIR4 Cap2-205ENSMUST00000225824 1634 ntBASIC24.19■■□□□ 1.46
Trpm6Q8CIR4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trpm6Q8CIR4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trpm6Q8CIR4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trpm6Q8CIR4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trpm6Q8CIR4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Trpm6Q8CIR4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Trpm6Q8CIR4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.18■■□□□ 1.46
Trpm6Q8CIR4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trpm6Q8CIR4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms