Protein–RNA interactions for Protein: Q8CII9

Crlf2, Cytokine receptor-like factor 2, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf2Q8CII9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Crlf2Q8CII9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Crlf2Q8CII9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Crlf2Q8CII9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Crlf2Q8CII9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Crlf2Q8CII9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.62■■□□□ 1.85
Crlf2Q8CII9 Gm27502-201ENSMUST00000183495 199 ntBASIC26.62■■□□□ 1.85
Crlf2Q8CII9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.61■■□□□ 1.85
Crlf2Q8CII9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.61■■□□□ 1.85
Crlf2Q8CII9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Crlf2Q8CII9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Crlf2Q8CII9 Gm5812-201ENSMUST00000061073 957 ntBASIC26.61■■□□□ 1.85
Crlf2Q8CII9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Crlf2Q8CII9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Crlf2Q8CII9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Crlf2Q8CII9 Particl-201ENSMUST00000205370 1560 ntBASIC26.58■■□□□ 1.85
Crlf2Q8CII9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.56■■□□□ 1.84
Crlf2Q8CII9 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.55■■□□□ 1.84
Crlf2Q8CII9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Crlf2Q8CII9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Crlf2Q8CII9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.54■■□□□ 1.84
Crlf2Q8CII9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Crlf2Q8CII9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Crlf2Q8CII9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.53■■□□□ 1.84
Crlf2Q8CII9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Crlf2Q8CII9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Crlf2Q8CII9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.51■■□□□ 1.83
Crlf2Q8CII9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Crlf2Q8CII9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Crlf2Q8CII9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Crlf2Q8CII9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Crlf2Q8CII9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.5■■□□□ 1.83
Crlf2Q8CII9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Crlf2Q8CII9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Crlf2Q8CII9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Crlf2Q8CII9 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.46■■□□□ 1.83
Crlf2Q8CII9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Crlf2Q8CII9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
Crlf2Q8CII9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
Crlf2Q8CII9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Crlf2Q8CII9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Crlf2Q8CII9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Crlf2Q8CII9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Crlf2Q8CII9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.43■■□□□ 1.82
Crlf2Q8CII9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Crlf2Q8CII9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Crlf2Q8CII9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Crlf2Q8CII9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Crlf2Q8CII9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Crlf2Q8CII9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Crlf2Q8CII9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Crlf2Q8CII9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.39■■□□□ 1.82
Crlf2Q8CII9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Crlf2Q8CII9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Crlf2Q8CII9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Crlf2Q8CII9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Crlf2Q8CII9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.37■■□□□ 1.81
Crlf2Q8CII9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Crlf2Q8CII9 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.36■■□□□ 1.81
Crlf2Q8CII9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Crlf2Q8CII9 Gm15546-201ENSMUST00000122095 826 ntBASIC26.35■■□□□ 1.81
Crlf2Q8CII9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
Crlf2Q8CII9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Crlf2Q8CII9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Crlf2Q8CII9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Crlf2Q8CII9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.32■■□□□ 1.8
Crlf2Q8CII9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.32■■□□□ 1.8
Crlf2Q8CII9 Gm14523-201ENSMUST00000117260 558 ntBASIC26.32■■□□□ 1.8
Crlf2Q8CII9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Crlf2Q8CII9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Crlf2Q8CII9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Crlf2Q8CII9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Crlf2Q8CII9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Crlf2Q8CII9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Crlf2Q8CII9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Crlf2Q8CII9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Crlf2Q8CII9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Crlf2Q8CII9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Crlf2Q8CII9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.27■■□□□ 1.8
Crlf2Q8CII9 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.26■■□□□ 1.79
Crlf2Q8CII9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Crlf2Q8CII9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Crlf2Q8CII9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Crlf2Q8CII9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Crlf2Q8CII9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.23■■□□□ 1.79
Crlf2Q8CII9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.23■■□□□ 1.79
Crlf2Q8CII9 Gm5921-201ENSMUST00000075898 882 ntBASIC26.23■■□□□ 1.79
Crlf2Q8CII9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Crlf2Q8CII9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Crlf2Q8CII9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Crlf2Q8CII9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Crlf2Q8CII9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Crlf2Q8CII9 Mir3960-201ENSMUST00000198213 73 ntBASIC26.2■■□□□ 1.78
Crlf2Q8CII9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Crlf2Q8CII9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Crlf2Q8CII9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Crlf2Q8CII9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Crlf2Q8CII9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Crlf2Q8CII9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Crlf2Q8CII9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms