Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rp1l1Q8CGM2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Rp1l1Q8CGM2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Rp1l1Q8CGM2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rp1l1Q8CGM2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rp1l1Q8CGM2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Rp1l1Q8CGM2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Rp1l1Q8CGM2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rp1l1Q8CGM2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rp1l1Q8CGM2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Rp1l1Q8CGM2 Gm30023-201ENSMUST00000197970 889 ntBASIC26■■□□□ 1.75
Rp1l1Q8CGM2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26■■□□□ 1.75
Rp1l1Q8CGM2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26■■□□□ 1.75
Rp1l1Q8CGM2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rp1l1Q8CGM2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Rp1l1Q8CGM2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Rp1l1Q8CGM2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.99■■□□□ 1.75
Rp1l1Q8CGM2 Gm12366-201ENSMUST00000121722 873 ntBASIC25.99■■□□□ 1.75
Rp1l1Q8CGM2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.99■■□□□ 1.75
Rp1l1Q8CGM2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.99■■□□□ 1.75
Rp1l1Q8CGM2 Gm5786-201ENSMUST00000085368 882 ntBASIC25.99■■□□□ 1.75
Rp1l1Q8CGM2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.98■■□□□ 1.75
Rp1l1Q8CGM2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rp1l1Q8CGM2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rp1l1Q8CGM2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rp1l1Q8CGM2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rp1l1Q8CGM2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
Rp1l1Q8CGM2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Rp1l1Q8CGM2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.95■■□□□ 1.75
Rp1l1Q8CGM2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Rp1l1Q8CGM2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rp1l1Q8CGM2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.94■■□□□ 1.74
Rp1l1Q8CGM2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.94■■□□□ 1.74
Rp1l1Q8CGM2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Rp1l1Q8CGM2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rp1l1Q8CGM2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rp1l1Q8CGM2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Rp1l1Q8CGM2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rp1l1Q8CGM2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rp1l1Q8CGM2 Scarna2-201ENSMUST00000157560 414 ntBASIC25.88■■□□□ 1.73
Rp1l1Q8CGM2 Gm4799-201ENSMUST00000095396 657 ntBASIC25.88■■□□□ 1.73
Rp1l1Q8CGM2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rp1l1Q8CGM2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Rp1l1Q8CGM2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Rp1l1Q8CGM2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Rp1l1Q8CGM2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rp1l1Q8CGM2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Rp1l1Q8CGM2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rp1l1Q8CGM2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.85■■□□□ 1.73
Rp1l1Q8CGM2 Gm11687-201ENSMUST00000118911 886 ntBASIC25.84■■□□□ 1.73
Rp1l1Q8CGM2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.83■■□□□ 1.73
Rp1l1Q8CGM2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rp1l1Q8CGM2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.83■■□□□ 1.72
Rp1l1Q8CGM2 Gm9806-201ENSMUST00000051080 552 ntBASIC25.83■■□□□ 1.72
Rp1l1Q8CGM2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.82■■□□□ 1.72
Rp1l1Q8CGM2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.81■■□□□ 1.72
Rp1l1Q8CGM2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Rp1l1Q8CGM2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rp1l1Q8CGM2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rp1l1Q8CGM2 Gm45364-201ENSMUST00000210883 159 ntBASIC25.79■■□□□ 1.72
Rp1l1Q8CGM2 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.79■■□□□ 1.72
Rp1l1Q8CGM2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Rp1l1Q8CGM2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Rp1l1Q8CGM2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rp1l1Q8CGM2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rp1l1Q8CGM2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Rp1l1Q8CGM2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.77■■□□□ 1.72
Rp1l1Q8CGM2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rp1l1Q8CGM2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Rp1l1Q8CGM2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Rp1l1Q8CGM2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rp1l1Q8CGM2 Gm27502-201ENSMUST00000183495 199 ntBASIC25.75■■□□□ 1.71
Rp1l1Q8CGM2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.75■■□□□ 1.71
Rp1l1Q8CGM2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
Rp1l1Q8CGM2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.74■■□□□ 1.71
Rp1l1Q8CGM2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rp1l1Q8CGM2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.74■■□□□ 1.71
Rp1l1Q8CGM2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Rp1l1Q8CGM2 Gm16437-201ENSMUST00000025669 507 ntBASIC25.73■■□□□ 1.71
Rp1l1Q8CGM2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
Rp1l1Q8CGM2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rp1l1Q8CGM2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rp1l1Q8CGM2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.71
Rp1l1Q8CGM2 Gm7332-201ENSMUST00000118351 454 ntBASIC25.7■■□□□ 1.71
Rp1l1Q8CGM2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rp1l1Q8CGM2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rp1l1Q8CGM2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rp1l1Q8CGM2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rp1l1Q8CGM2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.69■■□□□ 1.7
Rp1l1Q8CGM2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rp1l1Q8CGM2 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.69■■□□□ 1.7
Rp1l1Q8CGM2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rp1l1Q8CGM2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Rp1l1Q8CGM2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.66■■□□□ 1.7
Rp1l1Q8CGM2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rp1l1Q8CGM2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rp1l1Q8CGM2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rp1l1Q8CGM2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rp1l1Q8CGM2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Rp1l1Q8CGM2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms