Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Rtp1Q8C8C1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Rtp1Q8C8C1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Rtp1Q8C8C1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Rtp1Q8C8C1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Rtp1Q8C8C1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Rtp1Q8C8C1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Rtp1Q8C8C1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC28.02■■■□□ 2.08
Rtp1Q8C8C1 Gm12366-201ENSMUST00000121722 873 ntBASIC28.02■■■□□ 2.08
Rtp1Q8C8C1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC28.02■■■□□ 2.08
Rtp1Q8C8C1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC28.02■■■□□ 2.08
Rtp1Q8C8C1 Gm5786-201ENSMUST00000085368 882 ntBASIC28.02■■■□□ 2.08
Rtp1Q8C8C1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Rtp1Q8C8C1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
Rtp1Q8C8C1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Rtp1Q8C8C1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Rtp1Q8C8C1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28■■■□□ 2.07
Rtp1Q8C8C1 Gm15039-201ENSMUST00000118914 875 ntBASIC28■■■□□ 2.07
Rtp1Q8C8C1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Rtp1Q8C8C1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Rtp1Q8C8C1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.99■■■□□ 2.07
Rtp1Q8C8C1 Scarna2-201ENSMUST00000157560 414 ntBASIC27.99■■■□□ 2.07
Rtp1Q8C8C1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Rtp1Q8C8C1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Rtp1Q8C8C1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Rtp1Q8C8C1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Rtp1Q8C8C1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Rtp1Q8C8C1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.95■■■□□ 2.06
Rtp1Q8C8C1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.94■■■□□ 2.06
Rtp1Q8C8C1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Rtp1Q8C8C1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Rtp1Q8C8C1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Rtp1Q8C8C1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Rtp1Q8C8C1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.92■■■□□ 2.06
Rtp1Q8C8C1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.92■■■□□ 2.06
Rtp1Q8C8C1 Particl-201ENSMUST00000205370 1560 ntBASIC27.91■■■□□ 2.06
Rtp1Q8C8C1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Rtp1Q8C8C1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
Rtp1Q8C8C1 Gm11687-201ENSMUST00000118911 886 ntBASIC27.91■■■□□ 2.06
Rtp1Q8C8C1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Rtp1Q8C8C1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Rtp1Q8C8C1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Rtp1Q8C8C1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Rtp1Q8C8C1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Rtp1Q8C8C1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Rtp1Q8C8C1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Rtp1Q8C8C1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Rtp1Q8C8C1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Rtp1Q8C8C1 Gm9806-201ENSMUST00000051080 552 ntBASIC27.88■■■□□ 2.05
Rtp1Q8C8C1 Gm4799-201ENSMUST00000095396 657 ntBASIC27.88■■■□□ 2.05
Rtp1Q8C8C1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.87■■■□□ 2.05
Rtp1Q8C8C1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Rtp1Q8C8C1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
Rtp1Q8C8C1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Rtp1Q8C8C1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Rtp1Q8C8C1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Rtp1Q8C8C1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.84■■■□□ 2.05
Rtp1Q8C8C1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Rtp1Q8C8C1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Rtp1Q8C8C1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
Rtp1Q8C8C1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Rtp1Q8C8C1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
Rtp1Q8C8C1 Gm16437-201ENSMUST00000025669 507 ntBASIC27.82■■■□□ 2.04
Rtp1Q8C8C1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rtp1Q8C8C1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
Rtp1Q8C8C1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rtp1Q8C8C1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rtp1Q8C8C1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rtp1Q8C8C1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
Rtp1Q8C8C1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rtp1Q8C8C1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Rtp1Q8C8C1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC27.78■■■□□ 2.04
Rtp1Q8C8C1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
Rtp1Q8C8C1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Rtp1Q8C8C1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rtp1Q8C8C1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Rtp1Q8C8C1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rtp1Q8C8C1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rtp1Q8C8C1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Rtp1Q8C8C1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.75■■■□□ 2.03
Rtp1Q8C8C1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
Rtp1Q8C8C1 Gm30023-201ENSMUST00000197970 889 ntBASIC27.74■■■□□ 2.03
Rtp1Q8C8C1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Rtp1Q8C8C1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Rtp1Q8C8C1 Gm7332-201ENSMUST00000118351 454 ntBASIC27.72■■■□□ 2.03
Rtp1Q8C8C1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.72■■■□□ 2.03
Rtp1Q8C8C1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
Rtp1Q8C8C1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Rtp1Q8C8C1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Rtp1Q8C8C1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.69■■■□□ 2.02
Rtp1Q8C8C1 Gm27502-201ENSMUST00000183495 199 ntBASIC27.69■■■□□ 2.02
Rtp1Q8C8C1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Rtp1Q8C8C1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Rtp1Q8C8C1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.68■■■□□ 2.02
Rtp1Q8C8C1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.68■■■□□ 2.02
Rtp1Q8C8C1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Rtp1Q8C8C1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Rtp1Q8C8C1 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.67■■■□□ 2.02
Rtp1Q8C8C1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rtp1Q8C8C1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms