Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
Ptcd1Q8C2E4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
Ptcd1Q8C2E4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC29,87■■■□□ 2,37
Ptcd1Q8C2E4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC29,87■■■□□ 2,37
Ptcd1Q8C2E4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC29,86■■■□□ 2,37
Ptcd1Q8C2E4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29,85■■■□□ 2,37
Ptcd1Q8C2E4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC29,85■■■□□ 2,37
Ptcd1Q8C2E4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC29,84■■■□□ 2,37
Ptcd1Q8C2E4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC29,84■■■□□ 2,37
Ptcd1Q8C2E4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC29,84■■■□□ 2,37
Ptcd1Q8C2E4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC29,83■■■□□ 2,37
Ptcd1Q8C2E4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29,83■■■□□ 2,37
Ptcd1Q8C2E4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC29,83■■■□□ 2,37
Ptcd1Q8C2E4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC29,82■■■□□ 2,36
Ptcd1Q8C2E4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29,82■■■□□ 2,36
Ptcd1Q8C2E4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29,81■■■□□ 2,36
Ptcd1Q8C2E4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC29,81■■■□□ 2,36
Ptcd1Q8C2E4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29,79■■■□□ 2,36
Ptcd1Q8C2E4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC29,78■■■□□ 2,36
Ptcd1Q8C2E4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC29,78■■■□□ 2,36
Ptcd1Q8C2E4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29,78■■■□□ 2,36
Ptcd1Q8C2E4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC29,77■■■□□ 2,36
Ptcd1Q8C2E4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29,76■■■□□ 2,36
Ptcd1Q8C2E4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC29,76■■■□□ 2,35
Ptcd1Q8C2E4 Zxda-201ENSMUST00000117281 2621 ntBASIC29,76■■■□□ 2,35
Ptcd1Q8C2E4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC29,75■■■□□ 2,35
Ptcd1Q8C2E4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29,75■■■□□ 2,35
Ptcd1Q8C2E4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC29,74■■■□□ 2,35
Ptcd1Q8C2E4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29,73■■■□□ 2,35
Ptcd1Q8C2E4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC29,72■■■□□ 2,35
Ptcd1Q8C2E4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29,72■■■□□ 2,35
Ptcd1Q8C2E4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC29,71■■■□□ 2,35
Ptcd1Q8C2E4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC29,71■■■□□ 2,35
Ptcd1Q8C2E4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC29,71■■■□□ 2,35
Ptcd1Q8C2E4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC29,69■■■□□ 2,34
Ptcd1Q8C2E4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC29,68■■■□□ 2,34
Ptcd1Q8C2E4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29,68■■■□□ 2,34
Ptcd1Q8C2E4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC29,68■■■□□ 2,34
Ptcd1Q8C2E4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29,67■■■□□ 2,34
Ptcd1Q8C2E4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29,67■■■□□ 2,34
Ptcd1Q8C2E4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC29,67■■■□□ 2,34
Ptcd1Q8C2E4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC29,66■■■□□ 2,34
Ptcd1Q8C2E4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC29,65■■■□□ 2,34
Ptcd1Q8C2E4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC29,65■■■□□ 2,34
Ptcd1Q8C2E4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29,65■■■□□ 2,34
Ptcd1Q8C2E4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC29,64■■■□□ 2,34
Ptcd1Q8C2E4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC29,63■■■□□ 2,33
Ptcd1Q8C2E4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC29,63■■■□□ 2,33
Ptcd1Q8C2E4 Gm6206-201ENSMUST00000133472 2199 ntBASIC29,63■■■□□ 2,33
Ptcd1Q8C2E4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29,62■■■□□ 2,33
Ptcd1Q8C2E4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC29,62■■■□□ 2,33
Ptcd1Q8C2E4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC29,62■■■□□ 2,33
Ptcd1Q8C2E4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC29,62■■■□□ 2,33
Ptcd1Q8C2E4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29,62■■■□□ 2,33
Ptcd1Q8C2E4 Particl-201ENSMUST00000205370 1560 ntBASIC29,61■■■□□ 2,33
Ptcd1Q8C2E4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC29,61■■■□□ 2,33
Ptcd1Q8C2E4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29,6■■■□□ 2,33
Ptcd1Q8C2E4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC29,6■■■□□ 2,33
Ptcd1Q8C2E4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC29,6■■■□□ 2,33
Ptcd1Q8C2E4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29,59■■■□□ 2,33
Ptcd1Q8C2E4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC29,59■■■□□ 2,33
Ptcd1Q8C2E4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC29,59■■■□□ 2,33
Ptcd1Q8C2E4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC29,59■■■□□ 2,33
Ptcd1Q8C2E4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC29,59■■■□□ 2,33
Ptcd1Q8C2E4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29,57■■■□□ 2,32
Ptcd1Q8C2E4 Scarna2-201ENSMUST00000157560 414 ntBASIC29,57■■■□□ 2,32
Ptcd1Q8C2E4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29,56■■■□□ 2,32
Ptcd1Q8C2E4 Gm43445-201ENSMUST00000198564 2091 ntBASIC29,56■■■□□ 2,32
Ptcd1Q8C2E4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29,56■■■□□ 2,32
Ptcd1Q8C2E4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29,56■■■□□ 2,32
Ptcd1Q8C2E4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC29,55■■■□□ 2,32
Ptcd1Q8C2E4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29,54■■■□□ 2,32
Ptcd1Q8C2E4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC29,54■■■□□ 2,32
Ptcd1Q8C2E4 Gm12366-201ENSMUST00000121722 873 ntBASIC29,54■■■□□ 2,32
Ptcd1Q8C2E4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC29,54■■■□□ 2,32
Ptcd1Q8C2E4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC29,54■■■□□ 2,32
Ptcd1Q8C2E4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC29,54■■■□□ 2,32
Ptcd1Q8C2E4 Gm5786-201ENSMUST00000085368 882 ntBASIC29,54■■■□□ 2,32
Ptcd1Q8C2E4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC29,53■■■□□ 2,32
Ptcd1Q8C2E4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC29,53■■■□□ 2,32
Ptcd1Q8C2E4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Ptcd1Q8C2E4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC29,52■■■□□ 2,32
Ptcd1Q8C2E4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC29,52■■■□□ 2,32
Ptcd1Q8C2E4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29,51■■■□□ 2,31
Ptcd1Q8C2E4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29,51■■■□□ 2,31
Ptcd1Q8C2E4 Gm11687-201ENSMUST00000118911 886 ntBASIC29,51■■■□□ 2,31
Ptcd1Q8C2E4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC29,51■■■□□ 2,31
Ptcd1Q8C2E4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC29,51■■■□□ 2,31
Ptcd1Q8C2E4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC29,51■■■□□ 2,31
Ptcd1Q8C2E4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29,51■■■□□ 2,31
Ptcd1Q8C2E4 Gm9905-201ENSMUST00000065740 1845 ntBASIC29,5■■■□□ 2,31
Ptcd1Q8C2E4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29,5■■■□□ 2,31
Ptcd1Q8C2E4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC29,48■■■□□ 2,31
Ptcd1Q8C2E4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC29,48■■■□□ 2,31
Ptcd1Q8C2E4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC29,48■■■□□ 2,31
Ptcd1Q8C2E4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC29,48■■■□□ 2,31
Ptcd1Q8C2E4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC29,48■■■□□ 2,31
Ptcd1Q8C2E4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC29,48■■■□□ 2,31
Ptcd1Q8C2E4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29,48■■■□□ 2,31
Ptcd1Q8C2E4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC29,47■■■□□ 2,31
Retrieved 100 of 76,532 protein–RNA pairs in 38,2 ms