Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lrtm1Q8BXQ3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21■□□□□ 0.95
Lrtm1Q8BXQ3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Lrtm1Q8BXQ3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lrtm1Q8BXQ3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lrtm1Q8BXQ3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
Lrtm1Q8BXQ3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.99■□□□□ 0.95
Lrtm1Q8BXQ3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lrtm1Q8BXQ3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.98■□□□□ 0.95
Lrtm1Q8BXQ3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Lrtm1Q8BXQ3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Lrtm1Q8BXQ3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lrtm1Q8BXQ3 Nkain2-201ENSMUST00000092602 558 ntBASIC20.98■□□□□ 0.95
Lrtm1Q8BXQ3 Gm30023-201ENSMUST00000197970 889 ntBASIC20.97■□□□□ 0.95
Lrtm1Q8BXQ3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lrtm1Q8BXQ3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Lrtm1Q8BXQ3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrtm1Q8BXQ3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrtm1Q8BXQ3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lrtm1Q8BXQ3 Gm6821-201ENSMUST00000107540 542 ntBASIC20.92■□□□□ 0.94
Lrtm1Q8BXQ3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Lrtm1Q8BXQ3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Lrtm1Q8BXQ3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.92■□□□□ 0.94
Lrtm1Q8BXQ3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrtm1Q8BXQ3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrtm1Q8BXQ3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.91■□□□□ 0.94
Lrtm1Q8BXQ3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.91■□□□□ 0.94
Lrtm1Q8BXQ3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrtm1Q8BXQ3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrtm1Q8BXQ3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.91■□□□□ 0.94
Lrtm1Q8BXQ3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrtm1Q8BXQ3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrtm1Q8BXQ3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Lrtm1Q8BXQ3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrtm1Q8BXQ3 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.9■□□□□ 0.94
Lrtm1Q8BXQ3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrtm1Q8BXQ3 Gm8503-201ENSMUST00000118131 455 ntBASIC20.89■□□□□ 0.93
Lrtm1Q8BXQ3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Lrtm1Q8BXQ3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Lrtm1Q8BXQ3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lrtm1Q8BXQ3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Lrtm1Q8BXQ3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrtm1Q8BXQ3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lrtm1Q8BXQ3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lrtm1Q8BXQ3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.87■□□□□ 0.93
Lrtm1Q8BXQ3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lrtm1Q8BXQ3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrtm1Q8BXQ3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lrtm1Q8BXQ3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lrtm1Q8BXQ3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Lrtm1Q8BXQ3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrtm1Q8BXQ3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrtm1Q8BXQ3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrtm1Q8BXQ3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.84■□□□□ 0.93
Lrtm1Q8BXQ3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.84■□□□□ 0.93
Lrtm1Q8BXQ3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lrtm1Q8BXQ3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrtm1Q8BXQ3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lrtm1Q8BXQ3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lrtm1Q8BXQ3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Lrtm1Q8BXQ3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lrtm1Q8BXQ3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lrtm1Q8BXQ3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lrtm1Q8BXQ3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lrtm1Q8BXQ3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.82■□□□□ 0.92
Lrtm1Q8BXQ3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lrtm1Q8BXQ3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lrtm1Q8BXQ3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.81■□□□□ 0.92
Lrtm1Q8BXQ3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lrtm1Q8BXQ3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lrtm1Q8BXQ3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lrtm1Q8BXQ3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrtm1Q8BXQ3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrtm1Q8BXQ3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrtm1Q8BXQ3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrtm1Q8BXQ3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrtm1Q8BXQ3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrtm1Q8BXQ3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrtm1Q8BXQ3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lrtm1Q8BXQ3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lrtm1Q8BXQ3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lrtm1Q8BXQ3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Lrtm1Q8BXQ3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lrtm1Q8BXQ3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Lrtm1Q8BXQ3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.75■□□□□ 0.91
Lrtm1Q8BXQ3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Lrtm1Q8BXQ3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.74■□□□□ 0.91
Lrtm1Q8BXQ3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.74■□□□□ 0.91
Lrtm1Q8BXQ3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrtm1Q8BXQ3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrtm1Q8BXQ3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lrtm1Q8BXQ3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lrtm1Q8BXQ3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lrtm1Q8BXQ3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.72■□□□□ 0.91
Lrtm1Q8BXQ3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrtm1Q8BXQ3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lrtm1Q8BXQ3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Lrtm1Q8BXQ3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lrtm1Q8BXQ3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrtm1Q8BXQ3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms