Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.55■■□□□ 1.84
Abcf1Q6P542 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Abcf1Q6P542 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.55■■□□□ 1.84
Abcf1Q6P542 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Abcf1Q6P542 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.54■■□□□ 1.84
Abcf1Q6P542 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Abcf1Q6P542 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Abcf1Q6P542 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Abcf1Q6P542 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Abcf1Q6P542 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
Abcf1Q6P542 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
Abcf1Q6P542 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.51■■□□□ 1.83
Abcf1Q6P542 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Abcf1Q6P542 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
Abcf1Q6P542 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Abcf1Q6P542 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.48■■□□□ 1.83
Abcf1Q6P542 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Abcf1Q6P542 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Abcf1Q6P542 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Abcf1Q6P542 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Abcf1Q6P542 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
Abcf1Q6P542 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Abcf1Q6P542 Gm24970-201ENSMUST00000175582 82 ntBASIC26.47■■□□□ 1.83
Abcf1Q6P542 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.47■■□□□ 1.83
Abcf1Q6P542 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.47■■□□□ 1.83
Abcf1Q6P542 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
Abcf1Q6P542 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Abcf1Q6P542 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Abcf1Q6P542 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Abcf1Q6P542 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
Abcf1Q6P542 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Abcf1Q6P542 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Abcf1Q6P542 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Abcf1Q6P542 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Abcf1Q6P542 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.83
Abcf1Q6P542 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Abcf1Q6P542 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Abcf1Q6P542 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Abcf1Q6P542 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
Abcf1Q6P542 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Abcf1Q6P542 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Abcf1Q6P542 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Abcf1Q6P542 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Abcf1Q6P542 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Abcf1Q6P542 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Abcf1Q6P542 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.4■■□□□ 1.82
Abcf1Q6P542 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Abcf1Q6P542 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Abcf1Q6P542 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Abcf1Q6P542 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Abcf1Q6P542 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Abcf1Q6P542 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.38■■□□□ 1.81
Abcf1Q6P542 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Abcf1Q6P542 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Abcf1Q6P542 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.37■■□□□ 1.81
Abcf1Q6P542 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Abcf1Q6P542 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Abcf1Q6P542 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Abcf1Q6P542 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Abcf1Q6P542 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.36■■□□□ 1.81
Abcf1Q6P542 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Abcf1Q6P542 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Abcf1Q6P542 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Abcf1Q6P542 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.34■■□□□ 1.81
Abcf1Q6P542 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Abcf1Q6P542 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Abcf1Q6P542 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Abcf1Q6P542 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Abcf1Q6P542 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Abcf1Q6P542 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Abcf1Q6P542 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Abcf1Q6P542 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Abcf1Q6P542 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Abcf1Q6P542 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Abcf1Q6P542 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Abcf1Q6P542 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Abcf1Q6P542 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.3■■□□□ 1.8
Abcf1Q6P542 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Abcf1Q6P542 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Abcf1Q6P542 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Abcf1Q6P542 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Abcf1Q6P542 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Abcf1Q6P542 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Abcf1Q6P542 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.26■■□□□ 1.79
Abcf1Q6P542 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Abcf1Q6P542 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Abcf1Q6P542 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Abcf1Q6P542 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Abcf1Q6P542 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.25■■□□□ 1.79
Abcf1Q6P542 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Abcf1Q6P542 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Abcf1Q6P542 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Abcf1Q6P542 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Abcf1Q6P542 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.23■■□□□ 1.79
Abcf1Q6P542 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Abcf1Q6P542 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Abcf1Q6P542 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.22■■□□□ 1.79
Abcf1Q6P542 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Abcf1Q6P542 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Abcf1Q6P542 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.21■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms