Protein–RNA interactions for Protein: Q64221

Nhlh2, Helix-loop-helix protein 2, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlh2Q64221 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nhlh2Q64221 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nhlh2Q64221 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nhlh2Q64221 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nhlh2Q64221 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nhlh2Q64221 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Nhlh2Q64221 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.42■□□□□ 0.7
Nhlh2Q64221 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nhlh2Q64221 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nhlh2Q64221 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Nhlh2Q64221 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nhlh2Q64221 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nhlh2Q64221 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.41■□□□□ 0.7
Nhlh2Q64221 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nhlh2Q64221 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Nhlh2Q64221 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nhlh2Q64221 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Nhlh2Q64221 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
Nhlh2Q64221 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nhlh2Q64221 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Nhlh2Q64221 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nhlh2Q64221 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nhlh2Q64221 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.38■□□□□ 0.69
Nhlh2Q64221 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nhlh2Q64221 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nhlh2Q64221 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nhlh2Q64221 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.37■□□□□ 0.69
Nhlh2Q64221 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nhlh2Q64221 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Nhlh2Q64221 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nhlh2Q64221 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nhlh2Q64221 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nhlh2Q64221 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nhlh2Q64221 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Nhlh2Q64221 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nhlh2Q64221 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nhlh2Q64221 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nhlh2Q64221 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.34■□□□□ 0.69
Nhlh2Q64221 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nhlh2Q64221 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Nhlh2Q64221 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nhlh2Q64221 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nhlh2Q64221 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nhlh2Q64221 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nhlh2Q64221 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nhlh2Q64221 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nhlh2Q64221 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nhlh2Q64221 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nhlh2Q64221 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nhlh2Q64221 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Nhlh2Q64221 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nhlh2Q64221 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.28■□□□□ 0.68
Nhlh2Q64221 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nhlh2Q64221 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nhlh2Q64221 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nhlh2Q64221 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.27■□□□□ 0.68
Nhlh2Q64221 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Nhlh2Q64221 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.26■□□□□ 0.67
Nhlh2Q64221 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.26■□□□□ 0.67
Nhlh2Q64221 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nhlh2Q64221 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Nhlh2Q64221 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nhlh2Q64221 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nhlh2Q64221 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nhlh2Q64221 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nhlh2Q64221 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nhlh2Q64221 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nhlh2Q64221 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nhlh2Q64221 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nhlh2Q64221 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nhlh2Q64221 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nhlh2Q64221 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nhlh2Q64221 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nhlh2Q64221 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhlh2Q64221 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhlh2Q64221 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhlh2Q64221 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nhlh2Q64221 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nhlh2Q64221 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nhlh2Q64221 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nhlh2Q64221 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nhlh2Q64221 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nhlh2Q64221 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nhlh2Q64221 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nhlh2Q64221 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nhlh2Q64221 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Nhlh2Q64221 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nhlh2Q64221 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nhlh2Q64221 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nhlh2Q64221 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nhlh2Q64221 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nhlh2Q64221 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nhlh2Q64221 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nhlh2Q64221 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.16■□□□□ 0.66
Nhlh2Q64221 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nhlh2Q64221 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhlh2Q64221 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nhlh2Q64221 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nhlh2Q64221 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nhlh2Q64221 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms