Protein–RNA interactions for Protein: Q61660

Foxj1, Forkhead box protein J1, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxj1Q61660 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Foxj1Q61660 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Foxj1Q61660 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
Foxj1Q61660 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Foxj1Q61660 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Foxj1Q61660 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Foxj1Q61660 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.56■■□□□ 1.52
Foxj1Q61660 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.56■■□□□ 1.52
Foxj1Q61660 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.56■■□□□ 1.52
Foxj1Q61660 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Foxj1Q61660 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Foxj1Q61660 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.55■■□□□ 1.52
Foxj1Q61660 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Foxj1Q61660 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.55■■□□□ 1.52
Foxj1Q61660 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Foxj1Q61660 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Foxj1Q61660 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Foxj1Q61660 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.54■■□□□ 1.52
Foxj1Q61660 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Foxj1Q61660 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Foxj1Q61660 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Foxj1Q61660 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Foxj1Q61660 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.52■■□□□ 1.52
Foxj1Q61660 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.51■■□□□ 1.51
Foxj1Q61660 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Foxj1Q61660 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.5■■□□□ 1.51
Foxj1Q61660 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Foxj1Q61660 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Foxj1Q61660 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Foxj1Q61660 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Foxj1Q61660 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Foxj1Q61660 Cap2-205ENSMUST00000225824 1634 ntBASIC24.47■■□□□ 1.51
Foxj1Q61660 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Foxj1Q61660 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.47■■□□□ 1.51
Foxj1Q61660 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Foxj1Q61660 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Foxj1Q61660 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Foxj1Q61660 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Foxj1Q61660 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Foxj1Q61660 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Foxj1Q61660 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.44■■□□□ 1.5
Foxj1Q61660 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Foxj1Q61660 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Foxj1Q61660 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Foxj1Q61660 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.42■■□□□ 1.5
Foxj1Q61660 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Foxj1Q61660 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Foxj1Q61660 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Foxj1Q61660 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Foxj1Q61660 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.4■■□□□ 1.5
Foxj1Q61660 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Foxj1Q61660 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.39■■□□□ 1.5
Foxj1Q61660 Gm30023-201ENSMUST00000197970 889 ntBASIC24.39■■□□□ 1.49
Foxj1Q61660 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.38■■□□□ 1.49
Foxj1Q61660 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.38■■□□□ 1.49
Foxj1Q61660 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
Foxj1Q61660 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.37■■□□□ 1.49
Foxj1Q61660 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Foxj1Q61660 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.35■■□□□ 1.49
Foxj1Q61660 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Foxj1Q61660 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.35■■□□□ 1.49
Foxj1Q61660 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Foxj1Q61660 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Foxj1Q61660 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Foxj1Q61660 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Foxj1Q61660 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.34■■□□□ 1.49
Foxj1Q61660 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Foxj1Q61660 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.33■■□□□ 1.49
Foxj1Q61660 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.33■■□□□ 1.48
Foxj1Q61660 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Foxj1Q61660 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Foxj1Q61660 Gm6311-201ENSMUST00000073790 878 ntBASIC24.31■■□□□ 1.48
Foxj1Q61660 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Foxj1Q61660 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Foxj1Q61660 Amer2-203ENSMUST00000225247 2662 ntBASIC24.29■■□□□ 1.48
Foxj1Q61660 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Foxj1Q61660 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.28■■□□□ 1.48
Foxj1Q61660 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
Foxj1Q61660 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Foxj1Q61660 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Foxj1Q61660 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.26■■□□□ 1.47
Foxj1Q61660 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Foxj1Q61660 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Foxj1Q61660 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Foxj1Q61660 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Foxj1Q61660 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Foxj1Q61660 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Foxj1Q61660 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Foxj1Q61660 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Foxj1Q61660 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Foxj1Q61660 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.23■■□□□ 1.47
Foxj1Q61660 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Foxj1Q61660 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.22■■□□□ 1.47
Foxj1Q61660 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Foxj1Q61660 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Foxj1Q61660 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Foxj1Q61660 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Foxj1Q61660 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Foxj1Q61660 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.21■■□□□ 1.47
Foxj1Q61660 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms