Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Zic4Q61467 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Zic4Q61467 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Zic4Q61467 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zic4Q61467 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Zic4Q61467 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Zic4Q61467 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zic4Q61467 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Zic4Q61467 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Zic4Q61467 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Zic4Q61467 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zic4Q61467 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zic4Q61467 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zic4Q61467 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zic4Q61467 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zic4Q61467 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zic4Q61467 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Zic4Q61467 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Zic4Q61467 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Zic4Q61467 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zic4Q61467 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Zic4Q61467 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zic4Q61467 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zic4Q61467 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zic4Q61467 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zic4Q61467 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Zic4Q61467 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zic4Q61467 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Zic4Q61467 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Zic4Q61467 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.42■□□□□ 0.7
Zic4Q61467 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zic4Q61467 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Zic4Q61467 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Zic4Q61467 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Zic4Q61467 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Zic4Q61467 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Zic4Q61467 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Zic4Q61467 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Zic4Q61467 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Zic4Q61467 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Zic4Q61467 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Zic4Q61467 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Zic4Q61467 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Zic4Q61467 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Zic4Q61467 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Zic4Q61467 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Zic4Q61467 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Zic4Q61467 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Zic4Q61467 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.37■□□□□ 0.69
Zic4Q61467 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Zic4Q61467 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zic4Q61467 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Zic4Q61467 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Zic4Q61467 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Zic4Q61467 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Zic4Q61467 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Zic4Q61467 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Zic4Q61467 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Zic4Q61467 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Zic4Q61467 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Zic4Q61467 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Zic4Q61467 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Zic4Q61467 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.32■□□□□ 0.68
Zic4Q61467 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Zic4Q61467 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zic4Q61467 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zic4Q61467 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Zic4Q61467 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zic4Q61467 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Zic4Q61467 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.32■□□□□ 0.68
Zic4Q61467 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Zic4Q61467 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Zic4Q61467 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Zic4Q61467 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zic4Q61467 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zic4Q61467 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zic4Q61467 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zic4Q61467 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zic4Q61467 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zic4Q61467 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zic4Q61467 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Zic4Q61467 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zic4Q61467 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Zic4Q61467 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Zic4Q61467 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Zic4Q61467 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Zic4Q61467 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zic4Q61467 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zic4Q61467 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.25■□□□□ 0.67
Zic4Q61467 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zic4Q61467 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zic4Q61467 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zic4Q61467 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Zic4Q61467 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zic4Q61467 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Zic4Q61467 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zic4Q61467 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.24■□□□□ 0.67
Zic4Q61467 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zic4Q61467 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zic4Q61467 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms