Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
FntaQ61239 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
FntaQ61239 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
FntaQ61239 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.24■■□□□ 1.63
FntaQ61239 Gm17641-201ENSMUST00000166328 2350 ntBASIC25.24■■□□□ 1.63
FntaQ61239 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
FntaQ61239 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
FntaQ61239 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
FntaQ61239 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
FntaQ61239 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
FntaQ61239 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.22■■□□□ 1.63
FntaQ61239 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
FntaQ61239 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
FntaQ61239 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
FntaQ61239 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
FntaQ61239 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
FntaQ61239 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
FntaQ61239 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.18■■□□□ 1.62
FntaQ61239 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
FntaQ61239 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
FntaQ61239 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
FntaQ61239 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
FntaQ61239 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
FntaQ61239 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC25.16■■□□□ 1.62
FntaQ61239 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
FntaQ61239 Gm16148-201ENSMUST00000119653 893 ntBASIC25.16■■□□□ 1.62
FntaQ61239 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
FntaQ61239 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC25.16■■□□□ 1.62
FntaQ61239 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.15■■□□□ 1.62
FntaQ61239 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
FntaQ61239 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
FntaQ61239 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
FntaQ61239 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
FntaQ61239 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
FntaQ61239 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
FntaQ61239 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
FntaQ61239 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
FntaQ61239 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.13■■□□□ 1.61
FntaQ61239 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
FntaQ61239 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
FntaQ61239 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
FntaQ61239 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
FntaQ61239 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
FntaQ61239 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.1■■□□□ 1.61
FntaQ61239 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.09■■□□□ 1.61
FntaQ61239 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
FntaQ61239 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
FntaQ61239 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
FntaQ61239 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
FntaQ61239 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
FntaQ61239 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.07■■□□□ 1.6
FntaQ61239 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
FntaQ61239 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
FntaQ61239 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
FntaQ61239 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
FntaQ61239 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
FntaQ61239 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
FntaQ61239 Il17rd-202ENSMUST00000223942 2186 ntBASIC25.05■■□□□ 1.6
FntaQ61239 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
FntaQ61239 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
FntaQ61239 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
FntaQ61239 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
FntaQ61239 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
FntaQ61239 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
FntaQ61239 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
FntaQ61239 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
FntaQ61239 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.01■■□□□ 1.59
FntaQ61239 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
FntaQ61239 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
FntaQ61239 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
FntaQ61239 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
FntaQ61239 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
FntaQ61239 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
FntaQ61239 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
FntaQ61239 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
FntaQ61239 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
FntaQ61239 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
FntaQ61239 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.97■■□□□ 1.59
FntaQ61239 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
FntaQ61239 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
FntaQ61239 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.95■■□□□ 1.58
FntaQ61239 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
FntaQ61239 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.94■■□□□ 1.58
FntaQ61239 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
FntaQ61239 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
FntaQ61239 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC24.92■■□□□ 1.58
FntaQ61239 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
FntaQ61239 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
FntaQ61239 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
FntaQ61239 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
FntaQ61239 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC24.9■■□□□ 1.58
FntaQ61239 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
FntaQ61239 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
FntaQ61239 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
FntaQ61239 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
FntaQ61239 Gm20634-201ENSMUST00000090779 2956 ntBASIC24.89■■□□□ 1.58
FntaQ61239 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
FntaQ61239 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
FntaQ61239 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
FntaQ61239 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms