Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.65■□□□□ 0.58
Trp53rkaQ5U452 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trp53rkaQ5U452 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trp53rkaQ5U452 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trp53rkaQ5U452 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trp53rkaQ5U452 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trp53rkaQ5U452 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trp53rkaQ5U452 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trp53rkaQ5U452 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trp53rkaQ5U452 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trp53rkaQ5U452 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trp53rkaQ5U452 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trp53rkaQ5U452 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trp53rkaQ5U452 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trp53rkaQ5U452 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trp53rkaQ5U452 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trp53rkaQ5U452 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trp53rkaQ5U452 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trp53rkaQ5U452 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trp53rkaQ5U452 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trp53rkaQ5U452 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trp53rkaQ5U452 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.6■□□□□ 0.57
Trp53rkaQ5U452 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trp53rkaQ5U452 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trp53rkaQ5U452 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trp53rkaQ5U452 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.6■□□□□ 0.57
Trp53rkaQ5U452 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trp53rkaQ5U452 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.6■□□□□ 0.57
Trp53rkaQ5U452 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trp53rkaQ5U452 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trp53rkaQ5U452 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trp53rkaQ5U452 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trp53rkaQ5U452 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Trp53rkaQ5U452 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trp53rkaQ5U452 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trp53rkaQ5U452 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trp53rkaQ5U452 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.57■□□□□ 0.56
Trp53rkaQ5U452 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trp53rkaQ5U452 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trp53rkaQ5U452 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trp53rkaQ5U452 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trp53rkaQ5U452 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trp53rkaQ5U452 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trp53rkaQ5U452 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trp53rkaQ5U452 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trp53rkaQ5U452 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.55■□□□□ 0.56
Trp53rkaQ5U452 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.55■□□□□ 0.56
Trp53rkaQ5U452 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trp53rkaQ5U452 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Trp53rkaQ5U452 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trp53rkaQ5U452 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trp53rkaQ5U452 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trp53rkaQ5U452 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trp53rkaQ5U452 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.53■□□□□ 0.56
Trp53rkaQ5U452 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trp53rkaQ5U452 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trp53rkaQ5U452 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trp53rkaQ5U452 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trp53rkaQ5U452 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trp53rkaQ5U452 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trp53rkaQ5U452 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trp53rkaQ5U452 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trp53rkaQ5U452 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trp53rkaQ5U452 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trp53rkaQ5U452 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trp53rkaQ5U452 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trp53rkaQ5U452 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trp53rkaQ5U452 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trp53rkaQ5U452 Gm27322-201ENSMUST00000184007 104 ntBASIC18.5■□□□□ 0.55
Trp53rkaQ5U452 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.5■□□□□ 0.55
Trp53rkaQ5U452 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trp53rkaQ5U452 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trp53rkaQ5U452 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Trp53rkaQ5U452 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.49■□□□□ 0.55
Trp53rkaQ5U452 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trp53rkaQ5U452 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trp53rkaQ5U452 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.49■□□□□ 0.55
Trp53rkaQ5U452 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trp53rkaQ5U452 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trp53rkaQ5U452 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Trp53rkaQ5U452 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trp53rkaQ5U452 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trp53rkaQ5U452 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trp53rkaQ5U452 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trp53rkaQ5U452 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.48■□□□□ 0.55
Trp53rkaQ5U452 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trp53rkaQ5U452 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trp53rkaQ5U452 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trp53rkaQ5U452 Gm26115-201ENSMUST00000175605 87 ntBASIC18.46■□□□□ 0.55
Trp53rkaQ5U452 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trp53rkaQ5U452 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trp53rkaQ5U452 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.45■□□□□ 0.54
Trp53rkaQ5U452 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trp53rkaQ5U452 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trp53rkaQ5U452 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trp53rkaQ5U452 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trp53rkaQ5U452 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trp53rkaQ5U452 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trp53rkaQ5U452 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trp53rkaQ5U452 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms