Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.6■■□□□ 1.53
Rnf43Q5NCP0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Rnf43Q5NCP0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Rnf43Q5NCP0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rnf43Q5NCP0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf43Q5NCP0 Particl-201ENSMUST00000205370 1560 ntBASIC24.59■■□□□ 1.53
Rnf43Q5NCP0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Rnf43Q5NCP0 Gm30023-201ENSMUST00000197970 889 ntBASIC24.58■■□□□ 1.53
Rnf43Q5NCP0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rnf43Q5NCP0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rnf43Q5NCP0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rnf43Q5NCP0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Rnf43Q5NCP0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rnf43Q5NCP0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rnf43Q5NCP0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rnf43Q5NCP0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Rnf43Q5NCP0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rnf43Q5NCP0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rnf43Q5NCP0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.52■■□□□ 1.52
Rnf43Q5NCP0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rnf43Q5NCP0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Rnf43Q5NCP0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rnf43Q5NCP0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Rnf43Q5NCP0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rnf43Q5NCP0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rnf43Q5NCP0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Rnf43Q5NCP0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.48■■□□□ 1.51
Rnf43Q5NCP0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Rnf43Q5NCP0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Rnf43Q5NCP0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rnf43Q5NCP0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Rnf43Q5NCP0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rnf43Q5NCP0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rnf43Q5NCP0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rnf43Q5NCP0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rnf43Q5NCP0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rnf43Q5NCP0 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.46■■□□□ 1.51
Rnf43Q5NCP0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.45■■□□□ 1.5
Rnf43Q5NCP0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rnf43Q5NCP0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Rnf43Q5NCP0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rnf43Q5NCP0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Rnf43Q5NCP0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Rnf43Q5NCP0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rnf43Q5NCP0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Rnf43Q5NCP0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Rnf43Q5NCP0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf43Q5NCP0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf43Q5NCP0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf43Q5NCP0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.42■■□□□ 1.5
Rnf43Q5NCP0 Zxda-201ENSMUST00000117281 2621 ntBASIC24.42■■□□□ 1.5
Rnf43Q5NCP0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.42■■□□□ 1.5
Rnf43Q5NCP0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Rnf43Q5NCP0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Rnf43Q5NCP0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rnf43Q5NCP0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rnf43Q5NCP0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rnf43Q5NCP0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rnf43Q5NCP0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rnf43Q5NCP0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rnf43Q5NCP0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rnf43Q5NCP0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.39■■□□□ 1.49
Rnf43Q5NCP0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Rnf43Q5NCP0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Rnf43Q5NCP0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf43Q5NCP0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf43Q5NCP0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.38■■□□□ 1.49
Rnf43Q5NCP0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf43Q5NCP0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf43Q5NCP0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf43Q5NCP0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf43Q5NCP0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf43Q5NCP0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Rnf43Q5NCP0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rnf43Q5NCP0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.36■■□□□ 1.49
Rnf43Q5NCP0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rnf43Q5NCP0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Rnf43Q5NCP0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.35■■□□□ 1.49
Rnf43Q5NCP0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Rnf43Q5NCP0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Rnf43Q5NCP0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Rnf43Q5NCP0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rnf43Q5NCP0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Rnf43Q5NCP0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rnf43Q5NCP0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rnf43Q5NCP0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Rnf43Q5NCP0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rnf43Q5NCP0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rnf43Q5NCP0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf43Q5NCP0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf43Q5NCP0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf43Q5NCP0 Scarna2-201ENSMUST00000157560 414 ntBASIC24.27■■□□□ 1.48
Rnf43Q5NCP0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf43Q5NCP0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.27■■□□□ 1.48
Rnf43Q5NCP0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.26■■□□□ 1.47
Rnf43Q5NCP0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.26■■□□□ 1.47
Rnf43Q5NCP0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
Rnf43Q5NCP0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rnf43Q5NCP0 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.24■■□□□ 1.47
Rnf43Q5NCP0 Gm9806-201ENSMUST00000051080 552 ntBASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 173.3 ms