Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Vps13aQ5H8C4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Vps13aQ5H8C4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Vps13aQ5H8C4 Scarna2-201ENSMUST00000157560 414 ntBASIC24.73■■□□□ 1.55
Vps13aQ5H8C4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Vps13aQ5H8C4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Vps13aQ5H8C4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.71■■□□□ 1.55
Vps13aQ5H8C4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Vps13aQ5H8C4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Vps13aQ5H8C4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Vps13aQ5H8C4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Vps13aQ5H8C4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.69■■□□□ 1.54
Vps13aQ5H8C4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Vps13aQ5H8C4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.68■■□□□ 1.54
Vps13aQ5H8C4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Vps13aQ5H8C4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.68■■□□□ 1.54
Vps13aQ5H8C4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Vps13aQ5H8C4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Vps13aQ5H8C4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Vps13aQ5H8C4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Vps13aQ5H8C4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.66■■□□□ 1.54
Vps13aQ5H8C4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Vps13aQ5H8C4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.66■■□□□ 1.54
Vps13aQ5H8C4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Vps13aQ5H8C4 Gm9806-201ENSMUST00000051080 552 ntBASIC24.65■■□□□ 1.54
Vps13aQ5H8C4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Vps13aQ5H8C4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Vps13aQ5H8C4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Vps13aQ5H8C4 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.64■■□□□ 1.53
Vps13aQ5H8C4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Vps13aQ5H8C4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Vps13aQ5H8C4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.63■■□□□ 1.53
Vps13aQ5H8C4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Vps13aQ5H8C4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Vps13aQ5H8C4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Vps13aQ5H8C4 Gm16437-201ENSMUST00000025669 507 ntBASIC24.6■■□□□ 1.53
Vps13aQ5H8C4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Vps13aQ5H8C4 Gm11687-201ENSMUST00000118911 886 ntBASIC24.6■■□□□ 1.53
Vps13aQ5H8C4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Vps13aQ5H8C4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Vps13aQ5H8C4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Vps13aQ5H8C4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Vps13aQ5H8C4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Vps13aQ5H8C4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Vps13aQ5H8C4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Vps13aQ5H8C4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vps13aQ5H8C4 Gm7332-201ENSMUST00000118351 454 ntBASIC24.54■■□□□ 1.52
Vps13aQ5H8C4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vps13aQ5H8C4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Vps13aQ5H8C4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.52■■□□□ 1.52
Vps13aQ5H8C4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.52■■□□□ 1.52
Vps13aQ5H8C4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Vps13aQ5H8C4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.51■■□□□ 1.51
Vps13aQ5H8C4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.51■■□□□ 1.51
Vps13aQ5H8C4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Vps13aQ5H8C4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Vps13aQ5H8C4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Vps13aQ5H8C4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Vps13aQ5H8C4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Vps13aQ5H8C4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Vps13aQ5H8C4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Vps13aQ5H8C4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Vps13aQ5H8C4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Vps13aQ5H8C4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.46■■□□□ 1.51
Vps13aQ5H8C4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Vps13aQ5H8C4 Particl-201ENSMUST00000205370 1560 ntBASIC24.46■■□□□ 1.51
Vps13aQ5H8C4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Vps13aQ5H8C4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Vps13aQ5H8C4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.45■■□□□ 1.5
Vps13aQ5H8C4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Vps13aQ5H8C4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Vps13aQ5H8C4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Vps13aQ5H8C4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Vps13aQ5H8C4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Vps13aQ5H8C4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Vps13aQ5H8C4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Vps13aQ5H8C4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Vps13aQ5H8C4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.4■■□□□ 1.5
Vps13aQ5H8C4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Vps13aQ5H8C4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Vps13aQ5H8C4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Vps13aQ5H8C4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.39■■□□□ 1.5
Vps13aQ5H8C4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.39■■□□□ 1.49
Vps13aQ5H8C4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.39■■□□□ 1.49
Vps13aQ5H8C4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Vps13aQ5H8C4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Vps13aQ5H8C4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Vps13aQ5H8C4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vps13aQ5H8C4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.37■■□□□ 1.49
Vps13aQ5H8C4 Gm27502-201ENSMUST00000183495 199 ntBASIC24.37■■□□□ 1.49
Vps13aQ5H8C4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Vps13aQ5H8C4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Vps13aQ5H8C4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Vps13aQ5H8C4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Vps13aQ5H8C4 Gm14523-201ENSMUST00000117260 558 ntBASIC24.34■■□□□ 1.49
Vps13aQ5H8C4 Gm45364-201ENSMUST00000210883 159 ntBASIC24.34■■□□□ 1.49
Vps13aQ5H8C4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.33■■□□□ 1.49
Vps13aQ5H8C4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Vps13aQ5H8C4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Vps13aQ5H8C4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.32■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms