Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.47■■■□□ 2.63
Trpm3Q5F4S9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Trpm3Q5F4S9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
Trpm3Q5F4S9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC31.45■■■□□ 2.62
Trpm3Q5F4S9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Trpm3Q5F4S9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Trpm3Q5F4S9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Trpm3Q5F4S9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Trpm3Q5F4S9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Trpm3Q5F4S9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC31.43■■■□□ 2.62
Trpm3Q5F4S9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Trpm3Q5F4S9 Mir6538-201ENSMUST00000183713 110 ntBASIC31.43■■■□□ 2.62
Trpm3Q5F4S9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC31.42■■■□□ 2.62
Trpm3Q5F4S9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC31.42■■■□□ 2.62
Trpm3Q5F4S9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31.41■■■□□ 2.62
Trpm3Q5F4S9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.41■■■□□ 2.62
Trpm3Q5F4S9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Trpm3Q5F4S9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Trpm3Q5F4S9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Trpm3Q5F4S9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Trpm3Q5F4S9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Trpm3Q5F4S9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Trpm3Q5F4S9 Gm11175-201ENSMUST00000116172 543 ntBASIC31.36■■■□□ 2.61
Trpm3Q5F4S9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Trpm3Q5F4S9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Trpm3Q5F4S9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC31.34■■■□□ 2.61
Trpm3Q5F4S9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Trpm3Q5F4S9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Trpm3Q5F4S9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
Trpm3Q5F4S9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Trpm3Q5F4S9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
Trpm3Q5F4S9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Trpm3Q5F4S9 Gm43445-201ENSMUST00000198564 2091 ntBASIC31.31■■■□□ 2.6
Trpm3Q5F4S9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC31.3■■■□□ 2.6
Trpm3Q5F4S9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Trpm3Q5F4S9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Trpm3Q5F4S9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Trpm3Q5F4S9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC31.27■■■□□ 2.6
Trpm3Q5F4S9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Trpm3Q5F4S9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
Trpm3Q5F4S9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Trpm3Q5F4S9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Trpm3Q5F4S9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31.22■■■□□ 2.59
Trpm3Q5F4S9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Trpm3Q5F4S9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Trpm3Q5F4S9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Trpm3Q5F4S9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Trpm3Q5F4S9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Trpm3Q5F4S9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Trpm3Q5F4S9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Trpm3Q5F4S9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
Trpm3Q5F4S9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Trpm3Q5F4S9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
Trpm3Q5F4S9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
Trpm3Q5F4S9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
Trpm3Q5F4S9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
Trpm3Q5F4S9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Trpm3Q5F4S9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Trpm3Q5F4S9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC31.16■■■□□ 2.58
Trpm3Q5F4S9 Particl-201ENSMUST00000205370 1560 ntBASIC31.16■■■□□ 2.58
Trpm3Q5F4S9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Trpm3Q5F4S9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Trpm3Q5F4S9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
Trpm3Q5F4S9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC31.15■■■□□ 2.58
Trpm3Q5F4S9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Trpm3Q5F4S9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Trpm3Q5F4S9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Trpm3Q5F4S9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
Trpm3Q5F4S9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Trpm3Q5F4S9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Trpm3Q5F4S9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
Trpm3Q5F4S9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Trpm3Q5F4S9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Trpm3Q5F4S9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Trpm3Q5F4S9 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.11■■■□□ 2.57
Trpm3Q5F4S9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Trpm3Q5F4S9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Trpm3Q5F4S9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC31.09■■■□□ 2.57
Trpm3Q5F4S9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
Trpm3Q5F4S9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Trpm3Q5F4S9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
Trpm3Q5F4S9 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.07■■■□□ 2.56
Trpm3Q5F4S9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Trpm3Q5F4S9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.04■■■□□ 2.56
Trpm3Q5F4S9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Trpm3Q5F4S9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Trpm3Q5F4S9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Trpm3Q5F4S9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC30.99■■■□□ 2.55
Trpm3Q5F4S9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Trpm3Q5F4S9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Trpm3Q5F4S9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Trpm3Q5F4S9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC30.98■■■□□ 2.55
Trpm3Q5F4S9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Trpm3Q5F4S9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Trpm3Q5F4S9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC30.96■■■□□ 2.55
Trpm3Q5F4S9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Trpm3Q5F4S9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Trpm3Q5F4S9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Trpm3Q5F4S9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC30.95■■■□□ 2.54
Trpm3Q5F4S9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms