Protein–RNA interactions for Protein: Q4U4S6

Xirp2, Xin actin-binding repeat-containing protein 2, mousemouse

Predictions only

Length 3,784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xirp2Q4U4S6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Xirp2Q4U4S6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Xirp2Q4U4S6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xirp2Q4U4S6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xirp2Q4U4S6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Xirp2Q4U4S6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.77■□□□□ 0.6
Xirp2Q4U4S6 Gm4799-201ENSMUST00000095396 657 ntBASIC18.76■□□□□ 0.59
Xirp2Q4U4S6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xirp2Q4U4S6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Xirp2Q4U4S6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Xirp2Q4U4S6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Xirp2Q4U4S6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Xirp2Q4U4S6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Xirp2Q4U4S6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Xirp2Q4U4S6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Xirp2Q4U4S6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.73■□□□□ 0.59
Xirp2Q4U4S6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Xirp2Q4U4S6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Xirp2Q4U4S6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Xirp2Q4U4S6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Xirp2Q4U4S6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Xirp2Q4U4S6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Xirp2Q4U4S6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Xirp2Q4U4S6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Xirp2Q4U4S6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Xirp2Q4U4S6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Xirp2Q4U4S6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Xirp2Q4U4S6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Xirp2Q4U4S6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.66■□□□□ 0.58
Xirp2Q4U4S6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Xirp2Q4U4S6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Xirp2Q4U4S6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.66■□□□□ 0.58
Xirp2Q4U4S6 Gm12366-201ENSMUST00000121722 873 ntBASIC18.66■□□□□ 0.58
Xirp2Q4U4S6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.66■□□□□ 0.58
Xirp2Q4U4S6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.66■□□□□ 0.58
Xirp2Q4U4S6 Gm5786-201ENSMUST00000085368 882 ntBASIC18.66■□□□□ 0.58
Xirp2Q4U4S6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Xirp2Q4U4S6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Xirp2Q4U4S6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Xirp2Q4U4S6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Xirp2Q4U4S6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Xirp2Q4U4S6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Xirp2Q4U4S6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Xirp2Q4U4S6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.65■□□□□ 0.58
Xirp2Q4U4S6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Xirp2Q4U4S6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Xirp2Q4U4S6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Xirp2Q4U4S6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.63■□□□□ 0.57
Xirp2Q4U4S6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Xirp2Q4U4S6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Xirp2Q4U4S6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Xirp2Q4U4S6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.63■□□□□ 0.57
Xirp2Q4U4S6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Xirp2Q4U4S6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Xirp2Q4U4S6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Xirp2Q4U4S6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Xirp2Q4U4S6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Xirp2Q4U4S6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Xirp2Q4U4S6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Xirp2Q4U4S6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Xirp2Q4U4S6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Xirp2Q4U4S6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Xirp2Q4U4S6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Xirp2Q4U4S6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.59■□□□□ 0.57
Xirp2Q4U4S6 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.59■□□□□ 0.57
Xirp2Q4U4S6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Xirp2Q4U4S6 Gm30023-201ENSMUST00000197970 889 ntBASIC18.58■□□□□ 0.57
Xirp2Q4U4S6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.58■□□□□ 0.56
Xirp2Q4U4S6 Particl-201ENSMUST00000205370 1560 ntBASIC18.58■□□□□ 0.56
Xirp2Q4U4S6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Xirp2Q4U4S6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Xirp2Q4U4S6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Xirp2Q4U4S6 Scarna2-201ENSMUST00000157560 414 ntBASIC18.56■□□□□ 0.56
Xirp2Q4U4S6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Xirp2Q4U4S6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Xirp2Q4U4S6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.55■□□□□ 0.56
Xirp2Q4U4S6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Xirp2Q4U4S6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Xirp2Q4U4S6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Xirp2Q4U4S6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Xirp2Q4U4S6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Xirp2Q4U4S6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Xirp2Q4U4S6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Xirp2Q4U4S6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.54■□□□□ 0.56
Xirp2Q4U4S6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Xirp2Q4U4S6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Xirp2Q4U4S6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Xirp2Q4U4S6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Xirp2Q4U4S6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.53■□□□□ 0.56
Xirp2Q4U4S6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Xirp2Q4U4S6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Xirp2Q4U4S6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Xirp2Q4U4S6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Xirp2Q4U4S6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Xirp2Q4U4S6 Gm9806-201ENSMUST00000051080 552 ntBASIC18.51■□□□□ 0.55
Xirp2Q4U4S6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Xirp2Q4U4S6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Xirp2Q4U4S6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.51■□□□□ 0.55
Xirp2Q4U4S6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Xirp2Q4U4S6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms