Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tmem40Q4FJU9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
Tmem40Q4FJU9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.36■□□□□ 0.85
Tmem40Q4FJU9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tmem40Q4FJU9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem40Q4FJU9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem40Q4FJU9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.34■□□□□ 0.85
Tmem40Q4FJU9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem40Q4FJU9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tmem40Q4FJU9 Amer2-203ENSMUST00000225247 2662 ntBASIC20.33■□□□□ 0.85
Tmem40Q4FJU9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Tmem40Q4FJU9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tmem40Q4FJU9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tmem40Q4FJU9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Tmem40Q4FJU9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
Tmem40Q4FJU9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem40Q4FJU9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem40Q4FJU9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem40Q4FJU9 Mir6538-201ENSMUST00000183713 110 ntBASIC20.32■□□□□ 0.84
Tmem40Q4FJU9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.32■□□□□ 0.84
Tmem40Q4FJU9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tmem40Q4FJU9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Tmem40Q4FJU9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Tmem40Q4FJU9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.31■□□□□ 0.84
Tmem40Q4FJU9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem40Q4FJU9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.31■□□□□ 0.84
Tmem40Q4FJU9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tmem40Q4FJU9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.31■□□□□ 0.84
Tmem40Q4FJU9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.3■□□□□ 0.84
Tmem40Q4FJU9 Gm11175-201ENSMUST00000116172 543 ntBASIC20.3■□□□□ 0.84
Tmem40Q4FJU9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tmem40Q4FJU9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.29■□□□□ 0.84
Tmem40Q4FJU9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tmem40Q4FJU9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Tmem40Q4FJU9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.29■□□□□ 0.84
Tmem40Q4FJU9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tmem40Q4FJU9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tmem40Q4FJU9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tmem40Q4FJU9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.29■□□□□ 0.84
Tmem40Q4FJU9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Tmem40Q4FJU9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tmem40Q4FJU9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tmem40Q4FJU9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmem40Q4FJU9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.26■□□□□ 0.83
Tmem40Q4FJU9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.26■□□□□ 0.83
Tmem40Q4FJU9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Tmem40Q4FJU9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmem40Q4FJU9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmem40Q4FJU9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmem40Q4FJU9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tmem40Q4FJU9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Tmem40Q4FJU9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tmem40Q4FJU9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.22■□□□□ 0.83
Tmem40Q4FJU9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmem40Q4FJU9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmem40Q4FJU9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tmem40Q4FJU9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tmem40Q4FJU9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tmem40Q4FJU9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmem40Q4FJU9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmem40Q4FJU9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Tmem40Q4FJU9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmem40Q4FJU9 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.18■□□□□ 0.82
Tmem40Q4FJU9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tmem40Q4FJU9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Tmem40Q4FJU9 Cap2-205ENSMUST00000225824 1634 ntBASIC20.17■□□□□ 0.82
Tmem40Q4FJU9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.17■□□□□ 0.82
Tmem40Q4FJU9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmem40Q4FJU9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmem40Q4FJU9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmem40Q4FJU9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmem40Q4FJU9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmem40Q4FJU9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tmem40Q4FJU9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmem40Q4FJU9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.14■□□□□ 0.81
Tmem40Q4FJU9 Gm6311-201ENSMUST00000073790 878 ntBASIC20.14■□□□□ 0.81
Tmem40Q4FJU9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tmem40Q4FJU9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tmem40Q4FJU9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tmem40Q4FJU9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Tmem40Q4FJU9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tmem40Q4FJU9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tmem40Q4FJU9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.12■□□□□ 0.81
Tmem40Q4FJU9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Tmem40Q4FJU9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tmem40Q4FJU9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tmem40Q4FJU9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tmem40Q4FJU9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tmem40Q4FJU9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tmem40Q4FJU9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.1■□□□□ 0.81
Tmem40Q4FJU9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.1■□□□□ 0.81
Tmem40Q4FJU9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tmem40Q4FJU9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tmem40Q4FJU9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tmem40Q4FJU9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tmem40Q4FJU9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tmem40Q4FJU9 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.07■□□□□ 0.8
Tmem40Q4FJU9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tmem40Q4FJU9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Tmem40Q4FJU9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms