Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cks1brtQ3UNC9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cks1brtQ3UNC9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cks1brtQ3UNC9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cks1brtQ3UNC9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.21■□□□□ 0.35
Cks1brtQ3UNC9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cks1brtQ3UNC9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Cks1brtQ3UNC9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Cks1brtQ3UNC9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cks1brtQ3UNC9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cks1brtQ3UNC9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cks1brtQ3UNC9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cks1brtQ3UNC9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cks1brtQ3UNC9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cks1brtQ3UNC9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cks1brtQ3UNC9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cks1brtQ3UNC9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cks1brtQ3UNC9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cks1brtQ3UNC9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cks1brtQ3UNC9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cks1brtQ3UNC9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.18■□□□□ 0.34
Cks1brtQ3UNC9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cks1brtQ3UNC9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cks1brtQ3UNC9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cks1brtQ3UNC9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.17■□□□□ 0.34
Cks1brtQ3UNC9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cks1brtQ3UNC9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cks1brtQ3UNC9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cks1brtQ3UNC9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cks1brtQ3UNC9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cks1brtQ3UNC9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.16■□□□□ 0.34
Cks1brtQ3UNC9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cks1brtQ3UNC9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cks1brtQ3UNC9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cks1brtQ3UNC9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cks1brtQ3UNC9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cks1brtQ3UNC9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cks1brtQ3UNC9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cks1brtQ3UNC9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cks1brtQ3UNC9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cks1brtQ3UNC9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cks1brtQ3UNC9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cks1brtQ3UNC9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cks1brtQ3UNC9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cks1brtQ3UNC9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cks1brtQ3UNC9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cks1brtQ3UNC9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cks1brtQ3UNC9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cks1brtQ3UNC9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cks1brtQ3UNC9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cks1brtQ3UNC9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cks1brtQ3UNC9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cks1brtQ3UNC9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cks1brtQ3UNC9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cks1brtQ3UNC9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cks1brtQ3UNC9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cks1brtQ3UNC9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cks1brtQ3UNC9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cks1brtQ3UNC9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cks1brtQ3UNC9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cks1brtQ3UNC9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cks1brtQ3UNC9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cks1brtQ3UNC9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cks1brtQ3UNC9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cks1brtQ3UNC9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cks1brtQ3UNC9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cks1brtQ3UNC9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cks1brtQ3UNC9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cks1brtQ3UNC9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cks1brtQ3UNC9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cks1brtQ3UNC9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cks1brtQ3UNC9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cks1brtQ3UNC9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.07■□□□□ 0.32
Cks1brtQ3UNC9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cks1brtQ3UNC9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cks1brtQ3UNC9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cks1brtQ3UNC9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cks1brtQ3UNC9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Cks1brtQ3UNC9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Cks1brtQ3UNC9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cks1brtQ3UNC9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cks1brtQ3UNC9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cks1brtQ3UNC9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cks1brtQ3UNC9 AL845457.1-201ENSMUST00000197244 68 ntBASIC17.04■□□□□ 0.32
Cks1brtQ3UNC9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cks1brtQ3UNC9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cks1brtQ3UNC9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cks1brtQ3UNC9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cks1brtQ3UNC9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cks1brtQ3UNC9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cks1brtQ3UNC9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cks1brtQ3UNC9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cks1brtQ3UNC9 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.02■□□□□ 0.31
Cks1brtQ3UNC9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.02■□□□□ 0.31
Cks1brtQ3UNC9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Cks1brtQ3UNC9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cks1brtQ3UNC9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cks1brtQ3UNC9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cks1brtQ3UNC9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cks1brtQ3UNC9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms