Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.27■■□□□ 1.32
Spg11Q3UHA3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.27■■□□□ 1.31
Spg11Q3UHA3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Spg11Q3UHA3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Spg11Q3UHA3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Spg11Q3UHA3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.25■■□□□ 1.31
Spg11Q3UHA3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.24■■□□□ 1.31
Spg11Q3UHA3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Spg11Q3UHA3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Spg11Q3UHA3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.23■■□□□ 1.31
Spg11Q3UHA3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Spg11Q3UHA3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Spg11Q3UHA3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Spg11Q3UHA3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Spg11Q3UHA3 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.22■■□□□ 1.31
Spg11Q3UHA3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Spg11Q3UHA3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.21■■□□□ 1.31
Spg11Q3UHA3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Spg11Q3UHA3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Spg11Q3UHA3 Gm27502-201ENSMUST00000183495 199 ntBASIC23.2■■□□□ 1.3
Spg11Q3UHA3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Spg11Q3UHA3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Spg11Q3UHA3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Spg11Q3UHA3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Spg11Q3UHA3 Gm5921-201ENSMUST00000075898 882 ntBASIC23.18■■□□□ 1.3
Spg11Q3UHA3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.16■■□□□ 1.3
Spg11Q3UHA3 Gm14523-201ENSMUST00000117260 558 ntBASIC23.16■■□□□ 1.3
Spg11Q3UHA3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Spg11Q3UHA3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Spg11Q3UHA3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Spg11Q3UHA3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Spg11Q3UHA3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.14■■□□□ 1.3
Spg11Q3UHA3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Spg11Q3UHA3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.13■■□□□ 1.29
Spg11Q3UHA3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Spg11Q3UHA3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Spg11Q3UHA3 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.12■■□□□ 1.29
Spg11Q3UHA3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.11■■□□□ 1.29
Spg11Q3UHA3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Spg11Q3UHA3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Spg11Q3UHA3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.11■■□□□ 1.29
Spg11Q3UHA3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Spg11Q3UHA3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Spg11Q3UHA3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.09■■□□□ 1.29
Spg11Q3UHA3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Spg11Q3UHA3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Spg11Q3UHA3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Spg11Q3UHA3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.08■■□□□ 1.29
Spg11Q3UHA3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Spg11Q3UHA3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Spg11Q3UHA3 Particl-201ENSMUST00000205370 1560 ntBASIC23.07■■□□□ 1.28
Spg11Q3UHA3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.07■■□□□ 1.28
Spg11Q3UHA3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Spg11Q3UHA3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Spg11Q3UHA3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.06■■□□□ 1.28
Spg11Q3UHA3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.05■■□□□ 1.28
Spg11Q3UHA3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Spg11Q3UHA3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Spg11Q3UHA3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
Spg11Q3UHA3 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.04■■□□□ 1.28
Spg11Q3UHA3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Spg11Q3UHA3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Spg11Q3UHA3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.03■■□□□ 1.28
Spg11Q3UHA3 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.03■■□□□ 1.28
Spg11Q3UHA3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Spg11Q3UHA3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Spg11Q3UHA3 Gm10420-201ENSMUST00000121713 882 ntBASIC23■■□□□ 1.27
Spg11Q3UHA3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Spg11Q3UHA3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Spg11Q3UHA3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Spg11Q3UHA3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.99■■□□□ 1.27
Spg11Q3UHA3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Spg11Q3UHA3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Spg11Q3UHA3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Spg11Q3UHA3 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.98■■□□□ 1.27
Spg11Q3UHA3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Spg11Q3UHA3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Spg11Q3UHA3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Spg11Q3UHA3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.97■■□□□ 1.27
Spg11Q3UHA3 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.97■■□□□ 1.27
Spg11Q3UHA3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.97■■□□□ 1.27
Spg11Q3UHA3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Spg11Q3UHA3 Gm45364-201ENSMUST00000210883 159 ntBASIC22.97■■□□□ 1.27
Spg11Q3UHA3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Spg11Q3UHA3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Spg11Q3UHA3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Spg11Q3UHA3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.95■■□□□ 1.26
Spg11Q3UHA3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Spg11Q3UHA3 Serp2-204ENSMUST00000228055 705 ntBASIC22.94■■□□□ 1.26
Spg11Q3UHA3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Spg11Q3UHA3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Spg11Q3UHA3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Spg11Q3UHA3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Spg11Q3UHA3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Spg11Q3UHA3 Rps24-207ENSMUST00000224568 714 ntBASIC22.92■■□□□ 1.26
Spg11Q3UHA3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Spg11Q3UHA3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.91■■□□□ 1.26
Spg11Q3UHA3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Spg11Q3UHA3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Spg11Q3UHA3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms