Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Col5a2Q3U962 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Col5a2Q3U962 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Col5a2Q3U962 Particl-201ENSMUST00000205370 1560 ntBASIC29.52■■■□□ 2.32
Col5a2Q3U962 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
Col5a2Q3U962 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
Col5a2Q3U962 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
Col5a2Q3U962 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC29.51■■■□□ 2.31
Col5a2Q3U962 Gm12366-201ENSMUST00000121722 873 ntBASIC29.51■■■□□ 2.31
Col5a2Q3U962 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC29.51■■■□□ 2.31
Col5a2Q3U962 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC29.51■■■□□ 2.31
Col5a2Q3U962 Gm5786-201ENSMUST00000085368 882 ntBASIC29.51■■■□□ 2.31
Col5a2Q3U962 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
Col5a2Q3U962 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC29.5■■■□□ 2.31
Col5a2Q3U962 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Col5a2Q3U962 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Col5a2Q3U962 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Col5a2Q3U962 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Col5a2Q3U962 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Col5a2Q3U962 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Col5a2Q3U962 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Col5a2Q3U962 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Col5a2Q3U962 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC29.45■■■□□ 2.31
Col5a2Q3U962 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Col5a2Q3U962 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Col5a2Q3U962 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC29.44■■■□□ 2.3
Col5a2Q3U962 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Col5a2Q3U962 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Col5a2Q3U962 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Col5a2Q3U962 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC29.42■■■□□ 2.3
Col5a2Q3U962 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Col5a2Q3U962 Gm30023-201ENSMUST00000197970 889 ntBASIC29.42■■■□□ 2.3
Col5a2Q3U962 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
Col5a2Q3U962 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Col5a2Q3U962 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.4■■■□□ 2.3
Col5a2Q3U962 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Col5a2Q3U962 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Col5a2Q3U962 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC29.39■■■□□ 2.3
Col5a2Q3U962 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Col5a2Q3U962 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Col5a2Q3U962 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.38■■■□□ 2.29
Col5a2Q3U962 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC29.37■■■□□ 2.29
Col5a2Q3U962 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Col5a2Q3U962 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Col5a2Q3U962 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Col5a2Q3U962 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
Col5a2Q3U962 Scarna2-201ENSMUST00000157560 414 ntBASIC29.36■■■□□ 2.29
Col5a2Q3U962 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC29.35■■■□□ 2.29
Col5a2Q3U962 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Col5a2Q3U962 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC29.34■■■□□ 2.29
Col5a2Q3U962 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Col5a2Q3U962 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC29.32■■■□□ 2.28
Col5a2Q3U962 Gm4799-201ENSMUST00000095396 657 ntBASIC29.32■■■□□ 2.28
Col5a2Q3U962 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.32■■■□□ 2.28
Col5a2Q3U962 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Col5a2Q3U962 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Col5a2Q3U962 Gm9806-201ENSMUST00000051080 552 ntBASIC29.31■■■□□ 2.28
Col5a2Q3U962 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Col5a2Q3U962 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Col5a2Q3U962 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Col5a2Q3U962 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Col5a2Q3U962 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC29.28■■■□□ 2.28
Col5a2Q3U962 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
Col5a2Q3U962 Gm11687-201ENSMUST00000118911 886 ntBASIC29.27■■■□□ 2.28
Col5a2Q3U962 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Col5a2Q3U962 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29.27■■■□□ 2.28
Col5a2Q3U962 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Col5a2Q3U962 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
Col5a2Q3U962 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Col5a2Q3U962 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC29.24■■■□□ 2.27
Col5a2Q3U962 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Col5a2Q3U962 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC29.23■■■□□ 2.27
Col5a2Q3U962 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Col5a2Q3U962 AC154454.1-201ENSMUST00000225253 216 ntBASIC29.21■■■□□ 2.27
Col5a2Q3U962 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Col5a2Q3U962 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC29.19■■■□□ 2.26
Col5a2Q3U962 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.19■■■□□ 2.26
Col5a2Q3U962 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Col5a2Q3U962 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC29.18■■■□□ 2.26
Col5a2Q3U962 Pkd1-207ENSMUST00000228550 1050 ntBASIC29.17■■■□□ 2.26
Col5a2Q3U962 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Col5a2Q3U962 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Col5a2Q3U962 Gm45364-201ENSMUST00000210883 159 ntBASIC29.15■■■□□ 2.26
Col5a2Q3U962 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Col5a2Q3U962 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC29.13■■■□□ 2.25
Col5a2Q3U962 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Col5a2Q3U962 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Col5a2Q3U962 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Col5a2Q3U962 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Col5a2Q3U962 Gm16437-201ENSMUST00000025669 507 ntBASIC29.1■■■□□ 2.25
Col5a2Q3U962 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Col5a2Q3U962 Gm27502-201ENSMUST00000183495 199 ntBASIC29.09■■■□□ 2.25
Col5a2Q3U962 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
Col5a2Q3U962 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Col5a2Q3U962 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Col5a2Q3U962 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC29.08■■■□□ 2.25
Col5a2Q3U962 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
Col5a2Q3U962 Gm7332-201ENSMUST00000118351 454 ntBASIC29.07■■■□□ 2.24
Col5a2Q3U962 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC29.07■■■□□ 2.24
Col5a2Q3U962 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms