Protein–RNA interactions for Protein: Q3U595

UPF0545 protein C22orf39 homolog, mousemouse

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U595 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.82■□□□□ 0.76
Q3U595 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q3U595 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Q3U595 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q3U595 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Q3U595 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q3U595 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Q3U595 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3U595 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3U595 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3U595 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q3U595 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q3U595 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q3U595 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q3U595 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q3U595 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Q3U595 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Q3U595 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Q3U595 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.77■□□□□ 0.76
Q3U595 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q3U595 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q3U595 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q3U595 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q3U595 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Q3U595 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Q3U595 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Q3U595 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q3U595 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.74■□□□□ 0.75
Q3U595 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q3U595 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Q3U595 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3U595 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3U595 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.71■□□□□ 0.75
Q3U595 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3U595 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Q3U595 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Q3U595 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Q3U595 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Q3U595 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q3U595 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q3U595 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q3U595 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q3U595 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q3U595 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Q3U595 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q3U595 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q3U595 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q3U595 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q3U595 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Q3U595 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q3U595 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Q3U595 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Q3U595 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q3U595 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Q3U595 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Q3U595 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q3U595 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q3U595 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q3U595 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Q3U595 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q3U595 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q3U595 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q3U595 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Q3U595 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.62■□□□□ 0.73
Q3U595 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q3U595 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q3U595 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3U595 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q3U595 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Q3U595 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q3U595 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q3U595 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.6■□□□□ 0.73
Q3U595 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q3U595 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Q3U595 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.59■□□□□ 0.73
Q3U595 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.59■□□□□ 0.73
Q3U595 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Q3U595 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Q3U595 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Q3U595 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q3U595 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.57■□□□□ 0.72
Q3U595 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q3U595 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q3U595 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Q3U595 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q3U595 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.55■□□□□ 0.72
Q3U595 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Q3U595 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q3U595 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Q3U595 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Q3U595 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Q3U595 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Q3U595 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q3U595 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q3U595 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q3U595 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q3U595 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q3U595 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Q3U595 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q3U595 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms