Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fndc4Q3TR08 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fndc4Q3TR08 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fndc4Q3TR08 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.1■□□□□ 0.81
Fndc4Q3TR08 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Fndc4Q3TR08 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Fndc4Q3TR08 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.09■□□□□ 0.81
Fndc4Q3TR08 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Fndc4Q3TR08 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fndc4Q3TR08 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Fndc4Q3TR08 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fndc4Q3TR08 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Fndc4Q3TR08 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Fndc4Q3TR08 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Fndc4Q3TR08 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Fndc4Q3TR08 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Fndc4Q3TR08 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Fndc4Q3TR08 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Fndc4Q3TR08 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.07■□□□□ 0.8
Fndc4Q3TR08 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.06■□□□□ 0.8
Fndc4Q3TR08 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Fndc4Q3TR08 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Fndc4Q3TR08 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Fndc4Q3TR08 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fndc4Q3TR08 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fndc4Q3TR08 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.04■□□□□ 0.8
Fndc4Q3TR08 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fndc4Q3TR08 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Fndc4Q3TR08 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Fndc4Q3TR08 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Fndc4Q3TR08 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Fndc4Q3TR08 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Fndc4Q3TR08 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fndc4Q3TR08 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fndc4Q3TR08 Gm9397-201ENSMUST00000200125 605 ntBASIC20■□□□□ 0.79
Fndc4Q3TR08 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Fndc4Q3TR08 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fndc4Q3TR08 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Fndc4Q3TR08 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Fndc4Q3TR08 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.99■□□□□ 0.79
Fndc4Q3TR08 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fndc4Q3TR08 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fndc4Q3TR08 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fndc4Q3TR08 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fndc4Q3TR08 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fndc4Q3TR08 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fndc4Q3TR08 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fndc4Q3TR08 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Fndc4Q3TR08 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Fndc4Q3TR08 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fndc4Q3TR08 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fndc4Q3TR08 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Fndc4Q3TR08 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fndc4Q3TR08 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Fndc4Q3TR08 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Fndc4Q3TR08 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Fndc4Q3TR08 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fndc4Q3TR08 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.94■□□□□ 0.78
Fndc4Q3TR08 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fndc4Q3TR08 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.93■□□□□ 0.78
Fndc4Q3TR08 Gm45855-201ENSMUST00000212546 880 ntBASIC19.93■□□□□ 0.78
Fndc4Q3TR08 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Fndc4Q3TR08 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fndc4Q3TR08 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Fndc4Q3TR08 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fndc4Q3TR08 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fndc4Q3TR08 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Fndc4Q3TR08 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Fndc4Q3TR08 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Fndc4Q3TR08 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.91■□□□□ 0.78
Fndc4Q3TR08 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Fndc4Q3TR08 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Fndc4Q3TR08 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Fndc4Q3TR08 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fndc4Q3TR08 Gm24970-201ENSMUST00000175582 82 ntBASIC19.9■□□□□ 0.78
Fndc4Q3TR08 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fndc4Q3TR08 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Fndc4Q3TR08 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fndc4Q3TR08 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Fndc4Q3TR08 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Fndc4Q3TR08 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fndc4Q3TR08 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Fndc4Q3TR08 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.88■□□□□ 0.77
Fndc4Q3TR08 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.88■□□□□ 0.77
Fndc4Q3TR08 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fndc4Q3TR08 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.88■□□□□ 0.77
Fndc4Q3TR08 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Fndc4Q3TR08 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fndc4Q3TR08 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fndc4Q3TR08 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.87■□□□□ 0.77
Fndc4Q3TR08 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fndc4Q3TR08 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Fndc4Q3TR08 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fndc4Q3TR08 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fndc4Q3TR08 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Fndc4Q3TR08 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fndc4Q3TR08 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fndc4Q3TR08 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fndc4Q3TR08 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fndc4Q3TR08 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms