Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PrkdcP97313 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
PrkdcP97313 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PrkdcP97313 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrkdcP97313 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrkdcP97313 Gm11687-201ENSMUST00000118911 886 ntBASIC17.32■□□□□ 0.36
PrkdcP97313 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrkdcP97313 Gm7332-201ENSMUST00000118351 454 ntBASIC17.31■□□□□ 0.36
PrkdcP97313 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PrkdcP97313 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.3■□□□□ 0.36
PrkdcP97313 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PrkdcP97313 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PrkdcP97313 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PrkdcP97313 Gm16437-201ENSMUST00000025669 507 ntBASIC17.28■□□□□ 0.36
PrkdcP97313 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.27■□□□□ 0.35
PrkdcP97313 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PrkdcP97313 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PrkdcP97313 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PrkdcP97313 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PrkdcP97313 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PrkdcP97313 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PrkdcP97313 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PrkdcP97313 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.23■□□□□ 0.35
PrkdcP97313 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.23■□□□□ 0.35
PrkdcP97313 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PrkdcP97313 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.23■□□□□ 0.35
PrkdcP97313 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PrkdcP97313 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.22■□□□□ 0.35
PrkdcP97313 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PrkdcP97313 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PrkdcP97313 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.22■□□□□ 0.35
PrkdcP97313 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PrkdcP97313 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PrkdcP97313 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.2■□□□□ 0.34
PrkdcP97313 Gm27502-201ENSMUST00000183495 199 ntBASIC17.2■□□□□ 0.34
PrkdcP97313 Gm45364-201ENSMUST00000210883 159 ntBASIC17.19■□□□□ 0.34
PrkdcP97313 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrkdcP97313 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrkdcP97313 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrkdcP97313 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrkdcP97313 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrkdcP97313 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrkdcP97313 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PrkdcP97313 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.17■□□□□ 0.34
PrkdcP97313 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PrkdcP97313 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PrkdcP97313 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PrkdcP97313 Gm14523-201ENSMUST00000117260 558 ntBASIC17.16■□□□□ 0.34
PrkdcP97313 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.16■□□□□ 0.34
PrkdcP97313 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.16■□□□□ 0.34
PrkdcP97313 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PrkdcP97313 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PrkdcP97313 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PrkdcP97313 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PrkdcP97313 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PrkdcP97313 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PrkdcP97313 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PrkdcP97313 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PrkdcP97313 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
PrkdcP97313 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PrkdcP97313 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.11■□□□□ 0.33
PrkdcP97313 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PrkdcP97313 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.11■□□□□ 0.33
PrkdcP97313 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.11■□□□□ 0.33
PrkdcP97313 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PrkdcP97313 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PrkdcP97313 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkdcP97313 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PrkdcP97313 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.09■□□□□ 0.33
PrkdcP97313 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PrkdcP97313 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PrkdcP97313 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PrkdcP97313 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PrkdcP97313 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.08■□□□□ 0.33
PrkdcP97313 Particl-201ENSMUST00000205370 1560 ntBASIC17.08■□□□□ 0.33
PrkdcP97313 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PrkdcP97313 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PrkdcP97313 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.07■□□□□ 0.32
PrkdcP97313 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkdcP97313 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PrkdcP97313 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PrkdcP97313 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PrkdcP97313 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PrkdcP97313 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.06■□□□□ 0.32
PrkdcP97313 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PrkdcP97313 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PrkdcP97313 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.06■□□□□ 0.32
PrkdcP97313 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.06■□□□□ 0.32
PrkdcP97313 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkdcP97313 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkdcP97313 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkdcP97313 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.04■□□□□ 0.32
PrkdcP97313 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PrkdcP97313 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PrkdcP97313 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkdcP97313 Gm5921-201ENSMUST00000075898 882 ntBASIC17.04■□□□□ 0.32
PrkdcP97313 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkdcP97313 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.04■□□□□ 0.32
PrkdcP97313 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkdcP97313 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms