Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atxn1P54254 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.79■■□□□ 1.4
Atxn1P54254 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atxn1P54254 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atxn1P54254 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Atxn1P54254 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Atxn1P54254 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Atxn1P54254 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Atxn1P54254 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Atxn1P54254 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atxn1P54254 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Atxn1P54254 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Atxn1P54254 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atxn1P54254 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.75■■□□□ 1.39
Atxn1P54254 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.75■■□□□ 1.39
Atxn1P54254 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Atxn1P54254 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Atxn1P54254 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.74■■□□□ 1.39
Atxn1P54254 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.74■■□□□ 1.39
Atxn1P54254 Gm12366-201ENSMUST00000121722 873 ntBASIC23.74■■□□□ 1.39
Atxn1P54254 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.74■■□□□ 1.39
Atxn1P54254 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.74■■□□□ 1.39
Atxn1P54254 Gm5786-201ENSMUST00000085368 882 ntBASIC23.74■■□□□ 1.39
Atxn1P54254 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.73■■□□□ 1.39
Atxn1P54254 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Atxn1P54254 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Atxn1P54254 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Atxn1P54254 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Atxn1P54254 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.71■■□□□ 1.39
Atxn1P54254 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.71■■□□□ 1.39
Atxn1P54254 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Atxn1P54254 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Atxn1P54254 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.7■■□□□ 1.38
Atxn1P54254 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Atxn1P54254 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Atxn1P54254 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Atxn1P54254 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.69■■□□□ 1.38
Atxn1P54254 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Atxn1P54254 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Atxn1P54254 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Atxn1P54254 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Atxn1P54254 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.67■■□□□ 1.38
Atxn1P54254 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Atxn1P54254 Scarna2-201ENSMUST00000157560 414 ntBASIC23.65■■□□□ 1.38
Atxn1P54254 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Atxn1P54254 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Atxn1P54254 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Atxn1P54254 Zxda-201ENSMUST00000117281 2621 ntBASIC23.64■■□□□ 1.37
Atxn1P54254 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Atxn1P54254 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Atxn1P54254 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Atxn1P54254 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.63■■□□□ 1.37
Atxn1P54254 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Atxn1P54254 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Atxn1P54254 Gm11687-201ENSMUST00000118911 886 ntBASIC23.61■■□□□ 1.37
Atxn1P54254 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Atxn1P54254 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.59■■□□□ 1.37
Atxn1P54254 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Atxn1P54254 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Atxn1P54254 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Atxn1P54254 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.58■■□□□ 1.37
Atxn1P54254 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Atxn1P54254 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Atxn1P54254 Gm4799-201ENSMUST00000095396 657 ntBASIC23.58■■□□□ 1.37
Atxn1P54254 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Atxn1P54254 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Atxn1P54254 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Atxn1P54254 Gm22567-201ENSMUST00000175542 342 ntBASIC23.56■■□□□ 1.36
Atxn1P54254 Gm9806-201ENSMUST00000051080 552 ntBASIC23.56■■□□□ 1.36
Atxn1P54254 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Atxn1P54254 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Atxn1P54254 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Atxn1P54254 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
Atxn1P54254 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.55■■□□□ 1.36
Atxn1P54254 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Atxn1P54254 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Atxn1P54254 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Atxn1P54254 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.54■■□□□ 1.36
Atxn1P54254 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Atxn1P54254 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Atxn1P54254 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Atxn1P54254 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Atxn1P54254 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Atxn1P54254 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Atxn1P54254 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.52■■□□□ 1.36
Atxn1P54254 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Atxn1P54254 Gm16437-201ENSMUST00000025669 507 ntBASIC23.5■■□□□ 1.35
Atxn1P54254 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Atxn1P54254 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Atxn1P54254 Gm7332-201ENSMUST00000118351 454 ntBASIC23.49■■□□□ 1.35
Atxn1P54254 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Atxn1P54254 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Atxn1P54254 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Atxn1P54254 Particl-201ENSMUST00000205370 1560 ntBASIC23.47■■□□□ 1.35
Atxn1P54254 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.46■■□□□ 1.35
Atxn1P54254 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Atxn1P54254 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Atxn1P54254 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Atxn1P54254 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Atxn1P54254 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 268.8 ms