Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmx3P42581 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hmx3P42581 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.59■□□□□ 0.73
Hmx3P42581 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmx3P42581 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmx3P42581 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmx3P42581 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmx3P42581 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmx3P42581 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmx3P42581 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmx3P42581 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmx3P42581 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hmx3P42581 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmx3P42581 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmx3P42581 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmx3P42581 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmx3P42581 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hmx3P42581 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmx3P42581 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Hmx3P42581 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmx3P42581 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmx3P42581 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hmx3P42581 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Hmx3P42581 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmx3P42581 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hmx3P42581 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Hmx3P42581 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hmx3P42581 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hmx3P42581 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.52■□□□□ 0.72
Hmx3P42581 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hmx3P42581 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Hmx3P42581 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.51■□□□□ 0.71
Hmx3P42581 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hmx3P42581 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Hmx3P42581 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hmx3P42581 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.5■□□□□ 0.71
Hmx3P42581 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hmx3P42581 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.49■□□□□ 0.71
Hmx3P42581 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hmx3P42581 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hmx3P42581 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Hmx3P42581 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Hmx3P42581 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hmx3P42581 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hmx3P42581 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hmx3P42581 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Hmx3P42581 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hmx3P42581 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.47■□□□□ 0.71
Hmx3P42581 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hmx3P42581 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hmx3P42581 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hmx3P42581 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Hmx3P42581 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hmx3P42581 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hmx3P42581 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.46■□□□□ 0.71
Hmx3P42581 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hmx3P42581 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Hmx3P42581 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmx3P42581 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmx3P42581 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmx3P42581 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hmx3P42581 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmx3P42581 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hmx3P42581 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmx3P42581 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Hmx3P42581 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmx3P42581 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.44■□□□□ 0.7
Hmx3P42581 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmx3P42581 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmx3P42581 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmx3P42581 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmx3P42581 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Hmx3P42581 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.43■□□□□ 0.7
Hmx3P42581 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmx3P42581 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hmx3P42581 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.42■□□□□ 0.7
Hmx3P42581 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.42■□□□□ 0.7
Hmx3P42581 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Hmx3P42581 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hmx3P42581 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmx3P42581 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmx3P42581 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hmx3P42581 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmx3P42581 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmx3P42581 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hmx3P42581 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmx3P42581 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmx3P42581 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.7
Hmx3P42581 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hmx3P42581 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmx3P42581 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hmx3P42581 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Hmx3P42581 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Hmx3P42581 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hmx3P42581 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hmx3P42581 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.38■□□□□ 0.69
Hmx3P42581 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmx3P42581 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmx3P42581 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmx3P42581 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms