Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rom1P32958 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rom1P32958 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rom1P32958 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rom1P32958 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rom1P32958 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rom1P32958 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rom1P32958 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rom1P32958 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rom1P32958 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.85■□□□□ 0.61
Rom1P32958 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rom1P32958 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rom1P32958 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rom1P32958 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rom1P32958 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rom1P32958 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rom1P32958 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Rom1P32958 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rom1P32958 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rom1P32958 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rom1P32958 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rom1P32958 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rom1P32958 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rom1P32958 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rom1P32958 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rom1P32958 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rom1P32958 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rom1P32958 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rom1P32958 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rom1P32958 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rom1P32958 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rom1P32958 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.79■□□□□ 0.6
Rom1P32958 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rom1P32958 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rom1P32958 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rom1P32958 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rom1P32958 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rom1P32958 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rom1P32958 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rom1P32958 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rom1P32958 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rom1P32958 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rom1P32958 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rom1P32958 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rom1P32958 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.76■□□□□ 0.59
Rom1P32958 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rom1P32958 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rom1P32958 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rom1P32958 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rom1P32958 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rom1P32958 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rom1P32958 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.75■□□□□ 0.59
Rom1P32958 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rom1P32958 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rom1P32958 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rom1P32958 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rom1P32958 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rom1P32958 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rom1P32958 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rom1P32958 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rom1P32958 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rom1P32958 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.73■□□□□ 0.59
Rom1P32958 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rom1P32958 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rom1P32958 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rom1P32958 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rom1P32958 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rom1P32958 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rom1P32958 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rom1P32958 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rom1P32958 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.69■□□□□ 0.58
Rom1P32958 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.69■□□□□ 0.58
Rom1P32958 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rom1P32958 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rom1P32958 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rom1P32958 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rom1P32958 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rom1P32958 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rom1P32958 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rom1P32958 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Rom1P32958 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.68■□□□□ 0.58
Rom1P32958 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rom1P32958 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rom1P32958 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rom1P32958 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rom1P32958 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rom1P32958 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rom1P32958 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rom1P32958 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rom1P32958 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rom1P32958 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rom1P32958 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rom1P32958 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rom1P32958 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rom1P32958 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rom1P32958 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rom1P32958 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rom1P32958 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rom1P32958 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rom1P32958 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms