Protein–RNA interactions for Protein: P28571

Slc6a9, Sodium- and chloride-dependent glycine transporter 1, mousemouse

Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a9P28571 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc6a9P28571 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc6a9P28571 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a9P28571 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a9P28571 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a9P28571 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc6a9P28571 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.8■□□□□ 0.76
Slc6a9P28571 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.79■□□□□ 0.76
Slc6a9P28571 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc6a9P28571 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a9P28571 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a9P28571 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc6a9P28571 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a9P28571 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a9P28571 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a9P28571 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc6a9P28571 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Slc6a9P28571 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a9P28571 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a9P28571 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a9P28571 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc6a9P28571 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a9P28571 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a9P28571 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc6a9P28571 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.75■□□□□ 0.75
Slc6a9P28571 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc6a9P28571 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Slc6a9P28571 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a9P28571 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.73■□□□□ 0.75
Slc6a9P28571 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc6a9P28571 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a9P28571 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.72■□□□□ 0.75
Slc6a9P28571 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a9P28571 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc6a9P28571 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a9P28571 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a9P28571 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a9P28571 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a9P28571 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a9P28571 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slc6a9P28571 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Slc6a9P28571 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a9P28571 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a9P28571 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Slc6a9P28571 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a9P28571 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a9P28571 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a9P28571 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a9P28571 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc6a9P28571 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Slc6a9P28571 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Slc6a9P28571 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a9P28571 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
Slc6a9P28571 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Slc6a9P28571 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a9P28571 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a9P28571 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.67■□□□□ 0.74
Slc6a9P28571 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.67■□□□□ 0.74
Slc6a9P28571 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a9P28571 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a9P28571 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Slc6a9P28571 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Slc6a9P28571 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a9P28571 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Slc6a9P28571 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a9P28571 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a9P28571 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Slc6a9P28571 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a9P28571 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a9P28571 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a9P28571 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a9P28571 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a9P28571 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.6■□□□□ 0.73
Slc6a9P28571 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Slc6a9P28571 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Slc6a9P28571 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.6■□□□□ 0.73
Slc6a9P28571 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a9P28571 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a9P28571 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.59■□□□□ 0.73
Slc6a9P28571 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a9P28571 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a9P28571 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc6a9P28571 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Slc6a9P28571 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a9P28571 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a9P28571 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a9P28571 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.56■□□□□ 0.72
Slc6a9P28571 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a9P28571 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a9P28571 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a9P28571 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a9P28571 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.55■□□□□ 0.72
Slc6a9P28571 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.55■□□□□ 0.72
Slc6a9P28571 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a9P28571 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a9P28571 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Slc6a9P28571 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a9P28571 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a9P28571 Zfp131-205ENSMUST00000223812 663 ntBASIC19.54■□□□□ 0.72
Slc6a9P28571 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms