Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SnrpbP27048 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SnrpbP27048 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SnrpbP27048 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SnrpbP27048 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SnrpbP27048 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SnrpbP27048 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SnrpbP27048 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SnrpbP27048 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SnrpbP27048 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SnrpbP27048 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SnrpbP27048 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SnrpbP27048 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SnrpbP27048 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SnrpbP27048 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SnrpbP27048 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SnrpbP27048 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SnrpbP27048 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SnrpbP27048 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.77■□□□□ 0.92
SnrpbP27048 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SnrpbP27048 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.77■□□□□ 0.92
SnrpbP27048 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SnrpbP27048 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SnrpbP27048 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SnrpbP27048 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SnrpbP27048 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SnrpbP27048 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SnrpbP27048 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SnrpbP27048 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.74■□□□□ 0.91
SnrpbP27048 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SnrpbP27048 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SnrpbP27048 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.73■□□□□ 0.91
SnrpbP27048 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SnrpbP27048 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SnrpbP27048 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SnrpbP27048 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SnrpbP27048 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SnrpbP27048 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SnrpbP27048 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SnrpbP27048 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SnrpbP27048 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SnrpbP27048 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SnrpbP27048 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SnrpbP27048 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SnrpbP27048 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SnrpbP27048 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SnrpbP27048 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SnrpbP27048 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SnrpbP27048 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SnrpbP27048 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.68■□□□□ 0.9
SnrpbP27048 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SnrpbP27048 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SnrpbP27048 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SnrpbP27048 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SnrpbP27048 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SnrpbP27048 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.67■□□□□ 0.9
SnrpbP27048 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.67■□□□□ 0.9
SnrpbP27048 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SnrpbP27048 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SnrpbP27048 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SnrpbP27048 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SnrpbP27048 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SnrpbP27048 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SnrpbP27048 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SnrpbP27048 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SnrpbP27048 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SnrpbP27048 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SnrpbP27048 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SnrpbP27048 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.63■□□□□ 0.89
SnrpbP27048 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SnrpbP27048 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SnrpbP27048 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SnrpbP27048 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SnrpbP27048 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SnrpbP27048 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SnrpbP27048 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SnrpbP27048 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SnrpbP27048 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SnrpbP27048 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SnrpbP27048 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SnrpbP27048 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SnrpbP27048 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SnrpbP27048 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SnrpbP27048 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SnrpbP27048 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SnrpbP27048 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SnrpbP27048 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SnrpbP27048 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SnrpbP27048 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SnrpbP27048 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SnrpbP27048 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SnrpbP27048 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SnrpbP27048 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SnrpbP27048 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SnrpbP27048 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SnrpbP27048 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SnrpbP27048 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SnrpbP27048 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SnrpbP27048 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SnrpbP27048 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms