Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Gm30023-201ENSMUST00000197970 889 ntBASIC20.92■□□□□ 0.94
P04946 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04946 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
P04946 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
P04946 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
P04946 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.91■□□□□ 0.94
P04946 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P04946 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P04946 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.89■□□□□ 0.93
P04946 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P04946 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
P04946 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04946 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04946 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
P04946 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04946 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
P04946 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.85■□□□□ 0.93
P04946 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04946 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P04946 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P04946 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.83■□□□□ 0.92
P04946 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
P04946 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04946 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04946 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
P04946 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.81■□□□□ 0.92
P04946 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.81■□□□□ 0.92
P04946 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P04946 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
P04946 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04946 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
P04946 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04946 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
P04946 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
P04946 Gm11599-201ENSMUST00000118720 878 ntBASIC20.79■□□□□ 0.92
P04946 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
P04946 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.79■□□□□ 0.92
P04946 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04946 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04946 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04946 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04946 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
P04946 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
P04946 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.77■□□□□ 0.92
P04946 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
P04946 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
P04946 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
P04946 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04946 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P04946 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04946 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
P04946 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
P04946 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
P04946 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
P04946 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.72■□□□□ 0.91
P04946 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.72■□□□□ 0.91
P04946 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
P04946 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
P04946 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
P04946 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.71■□□□□ 0.91
P04946 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P04946 Particl-201ENSMUST00000205370 1560 ntBASIC20.7■□□□□ 0.9
P04946 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04946 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
P04946 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
P04946 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P04946 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
P04946 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
P04946 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.67■□□□□ 0.9
P04946 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P04946 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P04946 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
P04946 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.64■□□□□ 0.9
P04946 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04946 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
P04946 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P04946 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
P04946 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
P04946 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P04946 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P04946 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.61■□□□□ 0.89
P04946 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P04946 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04946 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04946 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
P04946 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
P04946 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
P04946 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
P04946 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
P04946 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04946 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04946 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.57■□□□□ 0.88
P04946 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.56■□□□□ 0.88
P04946 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P04946 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
P04946 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P04946 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
P04946 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04946 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04946 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms